RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 HHEXQ03014 270 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 FOXM1Q08050 763 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 CPZQ66K79 652 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 RAET1GQ6H3X3 334 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 LYSMD3Q7Z3D4 306 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 SLFN11Q7Z7L1 901 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 CREBRFQ8IUR6 639 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 Q8NA96 180 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 FNIP1Q8TF40 1166 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 CELF6Q96J87 481 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 SLC25A23Q9BV35 468 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 CATSPERBQ9H7T0 1116 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 SARS2Q9NP81 518 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 KCTD5Q9NXV2 234 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 GOLGA6AQ9NYA3 693 aa12.72□□□□□ -0.37
RABGGTA-213ENST00000560127 MYO7BQ6PIF6 2116 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 FER1L5A0AVI2 2057 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 MN1Q10571 1320 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 PALMO75781 387 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 KIAA0754O94854 1291 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 FGFR1OPO95684 399 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 MMEP08473 750 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 ANKRD34CP0C6C1 535 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 LHCGRP22888 699 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 VIPR1P32241 457 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 GFERP55789 205 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 SH3BP2P78314 561 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 NSUN2Q08J23 767 aaKnown RBP eCLIP12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 DNASE1L3Q13609 305 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 PAPD7Q5XG87 772 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 RBM43Q6ZSC3 357 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 Q6ZVL8 140 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 TRIM74Q86UV6 250 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 PDCD6IPQ8WUM4 868 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 SPOCK2Q92563 424 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 STAMBPL1Q96FJ0 436 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 SLC39A8Q9C0K1 460 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 LUZP4Q9P127 313 aa12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 PCDHGA9Q9Y5G4 932 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 PCYT1BQ9Y5K3 369 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-213ENST00000560127 PCNX1Q96RV3 2341 aa12.71□□□□□ -0.38
RABGGTA-213ENST00000560127 TTC24A2A3L6 582 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 NDUFA10O95299 355 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 TNFAIP3P21580 790 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 MMP8P22894 467 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 CASP14P31944 242 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 PAPOLAP51003 745 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 SCNN1BP51168 640 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 NDST2P52849 883 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 EPHA4P54764 986 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 DPTQ07507 201 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 CHAF1BQ13112 559 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 LRP8Q14114 963 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 PTPRRQ15256 657 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 DPCR1Q3MIW9 517 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 JMJD6Q6NYC1 403 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 IYDQ6PHW0 289 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 RFLNAQ6ZTI6 216 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 MARK2Q7KZI7 788 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 CT55Q8WUE5 264 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 CINPQ9BW66 212 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 TBC1D10AQ9BXI6 508 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 SLC29A3Q9BZD2 475 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 NUP62CLQ9H1M0 184 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 TBC1D29Q9UFV1 150 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 FHOD1Q9Y613 1164 aa12.7□□□□□ -0.38
RABGGTA-213ENST00000560127 ANKRD12Q6UB98 2062 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 A6NCN8 305 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 GOLGA6L3A6NEY3 463 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 PSMD11O00231 422 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 FGF10O15520 208 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 HTRA2O43464 458 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 C9P02748 559 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 CCNYL3P0C7X3 344 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 PRF1P14222 555 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 RFC1P35251 1148 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 GARSP41250 739 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 GPR1P46091 355 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 ADAMTSL4Q6UY14 1074 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 ARHGAP36Q6ZRI8 547 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 TECPR1Q7Z6L1 1165 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 TSPAN33Q86UF1 283 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 GALNT13Q8IUC8 556 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 PLXDC1Q8IUK5 500 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 RASGRP3Q8IV61 690 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 EPS8L1Q8TE68 723 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 SH3KBP1Q96B97 665 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 ELMO2Q96JJ3 720 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 C9orf72Q96LT7 481 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 OR6C1Q96RD1 312 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 RUFY1Q96T51 708 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 C11orf70Q9BRQ4 267 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 EPB41L1Q9H4G0 881 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 ACTL8Q9H568 366 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 LHX9Q9NQ69 397 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 OGFRQ9NZT2 677 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 CD84Q9UIB8 345 aa12.69□□□□□ -0.38
RABGGTA-213ENST00000560127 LNPEPQ9UIQ6 1025 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms