RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 HIC2Q96JB3 615 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 AGAP2Q99490 1192 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 CCDC3Q9BQI4 270 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 GSDMCQ9BYG8 508 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 DPEP2Q9H4A9 486 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 UBP1Q9NZI7 540 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 TRIM10Q9UDY6 481 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 LHX6Q9UPM6 363 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 SLC17A4Q9Y2C5 497 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 PCDHB1Q9Y5F3 818 aa12.53□□□□□ -0.4
LRRC28-214ENST00000559433 F5H423 210 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-214ENST00000559433 H7C0C1 242 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 ZW10O43264 779 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 NDST3O95803 873 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 FUCA1P04066 466 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 IVLP07476 585 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 PIRTP0C851 137 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 CD68P34810 354 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-214ENST00000559433 CETN2P41208 172 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 TNNT3P45378 269 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-214ENST00000559433 ATP5OP48047 213 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 KIF5AQ12840 1032 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 NOMO1Q15155 1222 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.41
LRRC28-214ENST00000559433 MARK2Q7KZI7 788 aaKnown RBP12.52□□□□□ -0.41
LRRC28-214ENST00000559433 NLRP8Q86W28 1048 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 ZNF567Q8N184 647 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 GPR156Q8NFN8 814 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 GPBAR1Q8TDU6 330 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 PTCD2Q8WV60 388 aaKnown RBP12.52□□□□□ -0.41
LRRC28-214ENST00000559433 HTR3CQ8WXA8 447 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 FGF11Q92914 225 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 VAT1Q99536 393 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 OSBPL8Q9BZF1 889 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 CDH19Q9H159 772 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 FAM83DQ9H4H8 585 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 ZFYVE1Q9HBF4 777 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 FAM153AQ9UHL3 310 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 SHOC2Q9UQ13 582 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 TMEM98Q9Y2Y6 226 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 ZNF711Q9Y462 761 aa12.52□□□□□ -0.41
LRRC28-214ENST00000559433 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 RGSL1A5PLK6 1076 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 TMX2-CTNND1H3BSU7 103 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 NOBOXO60393 691 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 TCEA3O75764 348 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 ASMTLO95671 621 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 RBMS1P29558 406 aaKnown RBP12.51□□□□□ -0.41
LRRC28-214ENST00000559433 PTPN7P35236 360 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 ADCY8P40145 1251 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 WNT3AP56704 352 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 OTUD4Q01804 1114 aaKnown RBP12.51□□□□□ -0.41
LRRC28-214ENST00000559433 XRCC4Q13426 336 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 SPIDRQ14159 915 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 C14orf28Q4W4Y0 310 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 HENMT1Q5T8I9 393 aaKnown RBP12.51□□□□□ -0.41
LRRC28-214ENST00000559433 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 OGFOD3Q6PK18 319 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 SLC30A9Q6PML9 568 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 PID1Q7Z2X4 250 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 PEX26Q7Z412 305 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 GALNT13Q8IUC8 556 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 CDKL3Q8IVW4 592 aaPredicted RBP12.51□□□□□ -0.41
LRRC28-214ENST00000559433 SYCE1Q8N0S2 351 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 UBL4BQ8N7F7 174 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 ALG3Q92685 438 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 COX14Q96I36 57 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 OR2M4Q96R27 311 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 WDR24Q96S15 920 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 FERMT1Q9BQL6 677 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 HERPUD2Q9BSE4 406 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 GPR63Q9BZJ6 419 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 C10orf88Q9H8K7 445 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 MAGEE1Q9HCI5 957 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 TRNAU1APQ9NX07 287 aaKnown RBP12.51□□□□□ -0.41
LRRC28-214ENST00000559433 TAAR2Q9P1P5 351 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 AMFRQ9UKV5 643 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 GPSM3Q9Y4H4 160 aa12.51□□□□□ -0.41
LRRC28-214ENST00000559433 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 FADS2P1A8MWK0 482 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 CASC3O15234 703 aaKnown RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 BRINP1O60477 761 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 TJP3O95049 919 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 FTCDO95954 541 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 ATP1A1P05023 1023 aaKnown RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 MPOP05164 745 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 RPLP0P05388 317 aaKnown RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 PTMAP06454 111 aaKnown RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 PYGMP11217 842 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 AK4P27144 223 aaPredicted RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 RBL1P28749 1068 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 GSDMDP57764 484 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 GABREP78334 506 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 CTBSQ01459 385 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 ISXQ2M1V0 245 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 ZNF569Q5MCW4 686 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 CERCAMQ5T4B2 595 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms