RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ARHGAP10A1A4S6 786 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 CCDC188H7C350 402 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 K7EM74 188 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 M0QYT0 321 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 KPNA3O00505 521 aaPredicted RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 ZNF185O15231 689 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 MSI1O43347 362 aaKnown RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 MGRN1O60291 552 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 RAD1O60671 282 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 ZBED1O96006 694 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 MYZAPP0CAP1 466 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 PRF1P14222 555 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 TSHRP16473 764 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 CASP1P29466 404 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 MTIF2P46199 727 aaKnown RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 TKTL1P51854 596 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 THOP1P52888 689 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 AP3M2P53677 418 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 EIF3BP55884 814 aaKnown RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 RPS26P62854 115 aaKnown RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 RPS21P63220 83 aaKnown RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 LRRC63Q05C16 580 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 SLC12A1Q13621 1099 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 ELOCQ15369 112 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 PPP2R5EQ16537 467 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 IFI16Q16666 785 aaKnown RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 SGSM1Q2NKQ1 1148 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 RAB41Q5JT25 222 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 FAXCQ5TGI0 409 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 KIAA1161Q6NSJ0 714 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 LVRNQ6Q4G3 990 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 SLITRK4Q8IW52 837 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 GSPT2Q8IYD1 628 aaKnown RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 APCDD1Q8J025 514 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 GUF1Q8N442 669 aaKnown RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 FSTL5Q8N475 847 aaPredicted RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 PCDH19Q8TAB3 1148 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 FRS2Q8WU20 508 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 SEC14L1Q92503 715 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 AZIN2Q96A70 460 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 ELMO3Q96BJ8 720 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 MIEF2Q96C03 454 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 DNAJC19Q96DA6 116 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 TCTN2Q96GX1 697 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 CCDC114Q96M63 670 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 C5orf34Q96MH7 638 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 TWNKQ96RR1 684 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 FGFBP2Q9BYJ0 223 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 LRRC27Q9C0I9 530 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 CLPBQ9H078 707 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 BLZF1Q9H2G9 400 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 TCEAL2Q9H3H9 227 aaPredicted RBP6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 SLC25A13Q9UJS0 675 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 NAALADL1Q9UQQ1 740 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 CAPN6Q9Y6Q1 641 aa6.87□□□□□ -1.31
SPTLC2-206ENST00000557566 TNRC6AQ8NDV7 1962 aaKnown RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 MACROD2A1Z1Q3 448 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 TRIM49BA6NDI0 452 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 CFAP73A6NFT4 308 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 TCP11X1B4DZS4 312 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 MYO1FO00160 1098 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 HGSO14964 777 aaPredicted RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 PPP1R12AO14974 1030 aaPredicted RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 EIF3DO15371 548 aaKnown RBP eCLIP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 AKR1B10O60218 316 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 HEXIM1O94992 359 aaKnown RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 PAK4O96013 591 aaPredicted RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 IGLV3-27P01718 113 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 SERPING1P05155 500 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 ALPIP09923 528 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 CCL4P13236 92 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 TCN2P20062 427 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 EIF4A3P38919 411 aaKnown RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 ASPAP45381 313 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 LEPRP48357 1165 aaKnown RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 BLKP51451 505 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 CYP2J2P51589 502 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 IRX1P78414 480 aaPredicted RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 INCA1Q0VD86 236 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 MRPL49Q13405 166 aaKnown RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 ITIH4Q14624 930 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 C16orf72Q14CZ0 275 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 VWA3BQ502W6 1294 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 DCAF6Q58WW2 860 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 ANKRD20A8PQ5CZ79 823 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 MS4A13Q5J8X5 152 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 TPRG1LQ5T0D9 272 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 PM20D1Q6GTS8 502 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 NADSYN1Q6IA69 706 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 TLDC1Q6P9B6 456 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 CYB5D1Q6P9G0 228 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 SHISA2Q6UWI4 295 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 ERN2Q76MJ5 926 aaKnown RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 PIGZQ86VD9 579 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 MCEMP1Q8IX19 187 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 CFAP52Q8N1V2 620 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 DTWD1Q8N5C7 304 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 Q8N9G6 341 aaPredicted RBP6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 XXYLT1Q8NBI6 393 aa6.86□□□□□ -1.31
SPTLC2-206ENST00000557566 ACTRT1Q8TDG2 376 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms