RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CASKIN1Q8WXD9 1431 aa4.03□□□□□ -1.76
VRK1-207ENST00000557352 RAPGEF6Q8TEU7 1601 aa4.03□□□□□ -1.77
VRK1-207ENST00000557352 ADCY10Q96PN6 1610 aa4.03□□□□□ -1.77
VRK1-207ENST00000557352 SUPT6HQ7KZ85 1726 aaKnown RBP4.02□□□□□ -1.77
VRK1-207ENST00000557352 A0A1B0GU03 582 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 ERI2A8K979 691 aaKnown RBP4.02□□□□□ -1.77
VRK1-207ENST00000557352 WDR1O75083 606 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 LDHAP00338 332 aaKnown RBP4.02□□□□□ -1.77
VRK1-207ENST00000557352 ZNF883P0CG24 379 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 IRF1P10914 325 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 HOXA1P49639 335 aaPredicted RBP4.02□□□□□ -1.77
VRK1-207ENST00000557352 EEF1A1P68104 462 aaKnown RBP4.02□□□□□ -1.77
VRK1-207ENST00000557352 SORDQ00796 357 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 EEF1A1P5Q5VTE0 462 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 ARHGAP17Q68EM7 881 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 ARHGAP11AQ6P4F7 1023 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 ZNF485Q8NCK3 441 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 ZNF524Q96C55 264 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 SLC41A2Q96JW4 573 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 ZSCAN31Q96LW9 406 aaPredicted RBP4.02□□□□□ -1.77
VRK1-207ENST00000557352 ARPC5LQ9BPX5 153 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 FAM110AQ9BQ89 295 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 POLR3CQ9BUI4 534 aaPredicted RBP4.02□□□□□ -1.77
VRK1-207ENST00000557352 FAM118AQ9NWS6 357 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 ERVK-11Q9UQG0 969 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 DLGAP4Q9Y2H0 992 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 GPR52Q9Y2T5 361 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 CCDC18Q5T9S5 1454 aa4.02□□□□□ -1.77
VRK1-207ENST00000557352 TEX13CA0A0J9YWL9 993 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 SEC14L5O43304 696 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 TBX6O95947 436 aaPredicted RBP4.01□□□□□ -1.77
VRK1-207ENST00000557352 FTCDO95954 541 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 RNF224P0DH78 156 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 ALDH4A1P30038 563 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 TERF1P54274 439 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 UFM1P61960 85 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 PMP22Q01453 160 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 NAE1Q13564 534 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 ZNF234Q14588 700 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 SIRPB2Q5JXA9 342 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 CCNYL2Q5T2Q4 361 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 DUS1LQ6P1R4 473 aaKnown RBP4.01□□□□□ -1.77
VRK1-207ENST00000557352 LDHAL6AQ6ZMR3 332 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 QSOX2Q6ZRP7 698 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 RRM2BQ7LG56 351 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 PCDH20Q8N6Y1 951 aaKnown RBP4.01□□□□□ -1.77
VRK1-207ENST00000557352 CNBD1Q8NA66 436 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 PIGTQ969N2 578 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 LGALS12Q96DT0 336 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 PABPC5Q96DU9 382 aaKnown RBP4.01□□□□□ -1.77
VRK1-207ENST00000557352 RPS6KC1Q96S38 1066 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 H2AFJQ9BTM1 129 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 TMEM160Q9NX00 188 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 A4GNTQ9UNA3 340 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 ABCA8O94911 1581 aa4.01□□□□□ -1.77
VRK1-207ENST00000557352 EHBP1L1Q8N3D4 1523 aa4□□□□□ -1.77
VRK1-207ENST00000557352 ITSN2Q9NZM3 1697 aa4□□□□□ -1.77
VRK1-207ENST00000557352 CTAGE9A4FU28 777 aa4□□□□□ -1.77
VRK1-207ENST00000557352 TUBBP07437 444 aa4□□□□□ -1.77
VRK1-207ENST00000557352 CTAGE8P0CG41 777 aa4□□□□□ -1.77
VRK1-207ENST00000557352 COX7A2P14406 83 aa4□□□□□ -1.77
VRK1-207ENST00000557352 NR1D1P20393 614 aa4□□□□□ -1.77
VRK1-207ENST00000557352 GABRB2P47870 512 aa4□□□□□ -1.77
VRK1-207ENST00000557352 MMP14P50281 582 aa4□□□□□ -1.77
VRK1-207ENST00000557352 TUBB4BP68371 445 aa4□□□□□ -1.77
VRK1-207ENST00000557352 PPFIA1Q13136 1202 aa4□□□□□ -1.77
VRK1-207ENST00000557352 PPIGQ13427 754 aaKnown RBP eCLIP4□□□□□ -1.77
VRK1-207ENST00000557352 SLC35E4Q6ICL7 350 aa4□□□□□ -1.77
VRK1-207ENST00000557352 CEACAM20Q6UY09 585 aa4□□□□□ -1.77
VRK1-207ENST00000557352 HAPLN4Q86UW8 402 aa4□□□□□ -1.77
VRK1-207ENST00000557352 CTAGE4Q8IX94 777 aa4□□□□□ -1.77
VRK1-207ENST00000557352 OR10V1Q8NGI7 309 aa4□□□□□ -1.77
VRK1-207ENST00000557352 ZCCHC10Q8TBK6 192 aa4□□□□□ -1.77
VRK1-207ENST00000557352 KLHL15Q96M94 604 aa4□□□□□ -1.77
VRK1-207ENST00000557352 C17orf77Q96MU5 243 aa4□□□□□ -1.77
VRK1-207ENST00000557352 COMMD10Q9Y6G5 202 aa4□□□□□ -1.77
VRK1-207ENST00000557352 SCINQ9Y6U3 715 aa4□□□□□ -1.77
VRK1-207ENST00000557352 ARHGEF11O15085 1522 aa4□□□□□ -1.77
VRK1-207ENST00000557352 LRRC9Q6ZRR7 1453 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 FHOD3Q2V2M9 1422 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 PIP5K1CO60331 668 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 HSD17B4P51659 736 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 CSNK2A1P68400 391 aaPredicted RBP3.99□□□□□ -1.77
VRK1-207ENST00000557352 GAGE5Q13069 117 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 GAGE6Q13070 117 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 BIRC2Q13490 618 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 GRAMD1BQ3KR37 738 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 ZNF876PQ49A33 203 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 ZNF280DQ6N043 979 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 FAM171BQ6P995 826 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 BRAT1Q6PJG6 821 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 SLC46A3Q7Z3Q1 461 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 MYPOPQ86VE0 399 aaPredicted RBP3.99□□□□□ -1.77
VRK1-207ENST00000557352 CSNK2A3Q8NEV1 391 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 HMGCLL1Q8TB92 370 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 RHBDF1Q96CC6 855 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 ORAI1Q96D31 301 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 ZBTB10Q96DT7 871 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 ST6GAL2Q96JF0 529 aa3.99□□□□□ -1.77
VRK1-207ENST00000557352 MPHOSPH8Q99549 860 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms