RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ELMO3Q96BJ8 720 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 AGAP2Q99490 1192 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 LGMNQ99538 433 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CLSTN3Q9BQT9 956 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CPPED1Q9BRF8 314 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GPR62Q9BZJ7 368 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ILKAPQ9H0C8 392 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HIPK3Q9H422 1215 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TCF7L2Q9NQB0 619 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 RIC8BQ9NVN3 520 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 NPAP1Q9NZP6 1156 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MARK1Q9P0L2 795 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 OSGIN1Q9UJX0 560 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PCDHGA11Q9Y5H2 935 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 DNAJC15Q9Y5T4 150 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 A0A096LPK6 155 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 OR6C75A6NL08 312 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 C2orf81A6NN90 581 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 E9PAM4 449 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 GFYI3L273 518 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 NPC1O15118 1278 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 LYPLA1O75608 230 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CDK14O94921 469 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 VAPBO95292 243 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 GNRH1P01148 92 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 HAPLN1P10915 354 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CD37P11049 281 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ESRRAP11474 423 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PIPP12273 146 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CDH1P12830 882 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ATP6V1B2P21281 511 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ME2P23368 584 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 IGFBP6P24592 240 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 IL12AP29459 219 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 GBP2P32456 591 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CSTF2P33240 577 aaKnown RBP eCLIP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 KPNA1P52294 538 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 MVDP53602 400 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 EPHB1P54762 984 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 RIPPLY1Q0D2K3 151 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TRAF3Q13114 568 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 THOC5Q13769 683 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ACOX1Q15067 660 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ZXDCQ2QGD7 858 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 RUNDC3AQ59EK9 446 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SYT6Q5T7P8 510 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF691Q5VV52 312 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PLPP4Q5VZY2 271 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 DCUN1D2Q6PH85 259 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 B3GNT6Q6ZMB0 384 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 EFL1Q7Z2Z2 1120 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PATL1Q86TB9 770 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 FAM124AQ86V42 546 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SCUBE3Q8IX30 993 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SLC15A3Q8IY34 581 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 LRRC71Q8N4P6 559 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TRPV3Q8NET8 790 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 NLGN2Q8NFZ4 835 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 OR2T34Q8NGX1 318 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 OR2T3Q8NH03 318 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 BRSK1Q8TDC3 778 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PHF10Q8WUB8 498 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 BCL7CQ8WUZ0 217 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 HEXDCQ8WVB3 486 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ANKRD49Q8WVL7 239 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TRAPPC12Q8WVT3 735 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CDKL2Q92772 493 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SLC35B4Q969S0 331 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 FUBP1Q96AE4 644 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TSPAN17Q96FV3 270 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 C3orf30Q96M34 536 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 AGAP3Q96P47 875 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 UIMC1Q96RL1 719 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TTC1Q99614 292 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 VN1R3Q9BXE9 311 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PAIP1Q9H074 479 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 MAGEH1Q9H213 219 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SUDS3Q9H7L9 328 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 FAM105AQ9NUU6 356 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 NUDT4Q9NZJ9 180 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 NTMQ9P121 344 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 BCS1LQ9Y276 419 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 HES2Q9Y543 173 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 RNF215Q9Y6U7 377 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 RGS13O14921 159 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TAPBPO15533 448 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 KLHL41O60662 606 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SEC22BO75396 215 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 RPP40O75818 363 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SLITRK5O94991 958 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SNX4O95219 450 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SRGAP2CP0DJJ0 459 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SULT1E1P49888 294 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 KPNA2P52292 529 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 YBX1P67809 324 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CCNA1P78396 465 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 PRKCQQ04759 706 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SP140Q13342 867 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TUSC3Q13454 348 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 KCNC3Q14003 757 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms