RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 RGS14O43566 566 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 SPRY3O43610 288 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 MTA2O94776 668 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 SOX30O94993 753 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 CDK4P11802 303 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 KRT10P13645 584 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 CDH2P19022 906 aaPredicted RBP5.3□□□□□ -1.56
FOXN3-206ENST00000554005 BDNFP23560 247 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 HSPA1LP34931 641 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 RFX2P48378 723 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 CTTNQ14247 550 aaKnown RBP5.3□□□□□ -1.56
FOXN3-206ENST00000554005 DRAP1Q14919 205 aaPredicted RBP5.3□□□□□ -1.56
FOXN3-206ENST00000554005 SHBQ15464 509 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 MEA1Q16626 185 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 DNTTIP2Q5QJE6 756 aaKnown RBP5.3□□□□□ -1.56
FOXN3-206ENST00000554005 OTUD1Q5VV17 481 aaPredicted RBP5.3□□□□□ -1.56
FOXN3-206ENST00000554005 SPATA1Q5VX52 437 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 FASTKD5Q7L8L6 764 aaKnown RBP5.3□□□□□ -1.56
FOXN3-206ENST00000554005 LINGO2Q7L985 606 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 GSTA5Q7RTV2 222 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 ARHGAP12Q8IWW6 846 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 TTC39CQ8N584 583 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 WDTC1Q8N5D0 677 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 MIGA1Q8NAN2 632 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 BEST2Q8NFU1 509 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 ZNF622Q969S3 477 aaKnown RBP eCLIP5.3□□□□□ -1.56
FOXN3-206ENST00000554005 SLITRK1Q96PX8 696 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 C1QTNF5Q9BXJ0 243 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 DLGAP2Q9P1A6 1054 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 INSL5Q9Y5Q6 135 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 SQORQ9Y6N5 450 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 USP54Q70EL1 1684 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 KAT6BQ8WYB5 2073 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 LRP6O75581 1613 aa5.3□□□□□ -1.56
FOXN3-206ENST00000554005 GTPBP1O00178 669 aaKnown RBP5.29□□□□□ -1.56
FOXN3-206ENST00000554005 VWA5AO00534 786 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 AP3D1O14617 1153 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 ITM2AO43736 263 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 GFPT2O94808 682 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 NDUFB4O95168 129 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 IPO7O95373 1038 aaKnown RBP5.29□□□□□ -1.56
FOXN3-206ENST00000554005 RARGP13631 454 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 IL7RP16871 459 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 PPARGP37231 505 aaPredicted RBP5.29□□□□□ -1.56
FOXN3-206ENST00000554005 PIGAP37287 484 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 HADHAP40939 763 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 CLNS1AP54105 237 aaKnown RBP5.29□□□□□ -1.56
FOXN3-206ENST00000554005 NIPAL4Q0D2K0 466 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 GPS2Q13227 327 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 CFAP161Q6P656 301 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 SMG7Q92540 1137 aaKnown RBP5.29□□□□□ -1.56
FOXN3-206ENST00000554005 COG3Q96JB2 828 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 FAM110AQ9BQ89 295 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 SDF4Q9BRK5 362 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 RBM38Q9H0Z9 239 aaKnown RBP5.29□□□□□ -1.56
FOXN3-206ENST00000554005 GHITMQ9H3K2 345 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 CEPT1Q9Y6K0 416 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 CKAP5Q14008 2032 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 PHRF1Q9P1Y6 1649 aaKnown RBP5.29□□□□□ -1.56
FOXN3-206ENST00000554005 TNS3Q68CZ2 1445 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 ARHGEF10O15013 1369 aa5.29□□□□□ -1.56
FOXN3-206ENST00000554005 NWD2Q9ULI1 1742 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 ANKRD26Q9UPS8 1709 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 PIK3C2AO00443 1686 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 PLCH1Q4KWH8 1693 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 KIF20BQ96Q89 1820 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 FAM237AA0A1B0GTK4 181 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 A0A1B0GVT2 93 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 TMEM202A6NGA9 273 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 INAFM1C9JVW0 142 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 J3KR12 359 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 TIMM23O14925 209 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 HNRNPCL1O60812 293 aaKnown RBP5.28□□□□□ -1.56
FOXN3-206ENST00000554005 NKX2-2O95096 273 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 NAGAP17050 411 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 PPP2R1AP30153 589 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 HOXD13P35453 343 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 COMPP49747 757 aaPredicted RBP5.28□□□□□ -1.56
FOXN3-206ENST00000554005 SORDQ00796 357 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 ROR2Q01974 943 aaKnown RBP5.28□□□□□ -1.56
FOXN3-206ENST00000554005 PRKG2Q13237 762 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 C2orf68Q2NKX9 166 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 USP41Q3LFD5 358 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 MMEL1Q495T6 779 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 FSCBQ5H9T9 825 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 C6orf141Q5SZD1 244 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 FNBP1LQ5T0N5 605 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 ANKRD54Q6NXT1 300 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 KLHL35Q6PF15 583 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 MTSS1LQ765P7 747 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 TECPR1Q7Z6L1 1165 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 HAPLN4Q86UW8 402 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 SCCPDHQ8NBX0 429 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 SCFD2Q8WU76 684 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 TRIB2Q92519 343 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 SLC41A2Q96JW4 573 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 C1orf74Q96LT6 269 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 ZNF570Q96NI8 536 aa5.28□□□□□ -1.56
FOXN3-206ENST00000554005 ESRP2Q9H6T0 727 aaKnown RBP5.28□□□□□ -1.56
FOXN3-206ENST00000554005 MKKSQ9NPJ1 570 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms