RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 TMIGD3P0DMS9 266 aaPredicted RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 EPHB2P29323 1055 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 MPGP29372 298 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 TKTP29401 623 aaKnown RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 GALNSP34059 522 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 PTGER3P43115 390 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 BRCC3P46736 316 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 JAK3P52333 1124 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 CLDN6P56747 220 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 GRIK3Q13003 919 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 DNASE1L3Q13609 305 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 KCNJ12Q14500 433 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 ZNF268Q14587 947 aaPredicted RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 KARSQ15046 597 aaKnown RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 MAPK6Q16659 721 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 TMTC4Q5T4D3 741 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 CYP4A22Q5TCH4 519 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 PMS2CLQ68D20 193 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 ZNF66Q6ZN08 573 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 HAUS6Q7Z4H7 955 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 RNF168Q8IYW5 571 aaPredicted RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 MINDY1Q8N5J2 469 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 RNF149Q8NC42 400 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 TSTD1Q8NFU3 115 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 SPATA18Q8TC71 538 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 IPO4Q8TEX9 1081 aaKnown RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 SETD7Q8WTS6 366 aaKnown RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 DEPDC1BQ8WUY9 529 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 NAF1Q96HR8 494 aaKnown RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 HIC2Q96JB3 615 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 NUDT22Q9BRQ3 303 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 EFHD1Q9BUP0 239 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 ADGRE3Q9BY15 652 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 LRRC2Q9BYS8 371 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 CXCL16Q9H2A7 254 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 UNC45AQ9H3U1 944 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 EBF3Q9H4W6 596 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 C8orf33Q9H7E9 229 aaPredicted RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 SAP30LQ9HAJ7 183 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 PRDM16Q9HAZ2 1276 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 ASAH2Q9NR71 780 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 FZD4Q9ULV1 537 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 PCDHA10Q9Y5I2 948 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 COL5A1P20908 1838 aaPredicted RBP4.48□□□□□ -1.69
CBX5-203ENST00000547872 NOTCH4Q99466 2003 aa4.48□□□□□ -1.69
CBX5-203ENST00000547872 ZFYVE26Q68DK2 2539 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 IGF2RP11717 2491 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 MYBPHLA2RUH7 354 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 SMCO2A6NFE2 343 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 H0Y626 953 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 J3KTA2 159 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 ZNF197O14709 1029 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 ADAMTS3O15072 1205 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 B4GALT5O43286 388 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 TSPAN1O60635 241 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 CBFA2T3O75081 653 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 TRIM16O95361 564 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 SEC24AO95486 1093 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 APBB3O95704 486 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 LATS1O95835 1130 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 SETSIPP0DME0 302 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 MMP8P22894 467 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 HOXA9P31269 272 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 EIF2S3P41091 472 aaKnown RBP4.47□□□□□ -1.69
CBX5-203ENST00000547872 ROR1Q01973 937 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 SEMG2Q02383 582 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 DSC1Q08554 894 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 GRSF1Q12849 480 aaKnown RBP eCLIP4.47□□□□□ -1.69
CBX5-203ENST00000547872 SEMA3BQ13214 749 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 LY6DQ14210 128 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 CSHL1Q14406 222 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 DMC1Q14565 340 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 TRIP6Q15654 476 aaKnown RBP4.47□□□□□ -1.69
CBX5-203ENST00000547872 AWAT1Q58HT5 328 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 CEP78Q5JTW2 689 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 RANBP10Q6VN20 620 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 TOGARAM2Q6ZUX3 1019 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 MIER3Q7Z3K6 550 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 ZNF410Q86VK4 478 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 CNGA4Q8IV77 575 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 MFSD6LQ8IWD5 586 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 SRRM1Q8IYB3 904 aaKnown RBP4.47□□□□□ -1.69
CBX5-203ENST00000547872 SMAP1Q8IYB5 467 aaPredicted RBP4.47□□□□□ -1.69
CBX5-203ENST00000547872 HACE1Q8IYU2 909 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 STKLD1Q8NE28 680 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 PMM1Q92871 262 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 C18orf8Q96DM3 657 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 PRR11Q96HE9 360 aaPredicted RBP4.47□□□□□ -1.69
CBX5-203ENST00000547872 TMEM41AQ96HV5 264 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 POLR3CQ9BUI4 534 aaPredicted RBP4.47□□□□□ -1.69
CBX5-203ENST00000547872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.47□□□□□ -1.69
CBX5-203ENST00000547872 NRIP3Q9NQ35 241 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 GAR1Q9NY12 217 aaKnown RBP4.47□□□□□ -1.69
CBX5-203ENST00000547872 VPS4AQ9UN37 437 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 GDAQ9Y2T3 454 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 INSL5Q9Y5Q6 135 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 PCSK5Q92824 1860 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 THADAQ6YHU6 1953 aa4.47□□□□□ -1.69
CBX5-203ENST00000547872 NUP205Q92621 2012 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms