RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ID4P47928 161 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 VPS41P49754 854 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 HK3P52790 923 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 BNIP3Q12983 259 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 LAMB3Q13751 1172 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 TPSAB1Q15661 275 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 ZNF542PQ5EBM4 170 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 SYDE1Q6ZW31 735 aaPredicted RBP16.71■□□□□ 0.27
CCDC38-203ENST00000546803 KANSL1Q7Z3B3 1105 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 NAXDQ8IW45 347 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 OR52K1Q8NGK4 314 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 COX14Q96I36 57 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 FRMD8Q9BZ67 464 aaPredicted RBP16.71■□□□□ 0.27
CCDC38-203ENST00000546803 IL26Q9NPH9 171 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 KLF15Q9UIH9 416 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 CSNK1G3Q9Y6M4 447 aa16.71■□□□□ 0.27
CCDC38-203ENST00000546803 ANKRD36A6QL64 1941 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 FADS2P1A8MWK0 482 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 LDB2O43679 373 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 SH3BP5O60239 455 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 TNFP01375 233 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 TPH1P17752 444 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 DGKAP23743 735 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 HADHAP40939 763 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 SARNPP82979 210 aaKnown RBP16.7■□□□□ 0.26
CCDC38-203ENST00000546803 PPP1R7Q15435 360 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 GATAD2AQ86YP4 633 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 HID1Q8IV36 788 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 SDR16C5Q8N3Y7 309 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 OR4K2Q8NGD2 314 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 SETD7Q8WTS6 366 aaKnown RBP16.7■□□□□ 0.26
CCDC38-203ENST00000546803 OR1E3Q8WZA6 343 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 TSACCQ96A04 125 aaPredicted RBP16.7■□□□□ 0.26
CCDC38-203ENST00000546803 FGF22Q9HCT0 170 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 APOBEC3BQ9UH17 382 aaKnown RBP16.7■□□□□ 0.26
CCDC38-203ENST00000546803 APPL1Q9UKG1 709 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 CNOT6Q9ULM6 557 aaKnown RBP16.7■□□□□ 0.26
CCDC38-203ENST00000546803 SLC17A4Q9Y2C5 497 aa16.7■□□□□ 0.26
CCDC38-203ENST00000546803 CACNA1EQ15878 2313 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 GLYATL1P3A0A0U1RQE8 302 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 PRSS38A1L453 326 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 INPP4BO15327 924 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 BUD23O43709 281 aaKnown RBP16.69■□□□□ 0.26
CCDC38-203ENST00000546803 SDC3O75056 442 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 CEACAM5P06731 702 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 IVLP07476 585 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 CTSEP14091 401 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 GRIA1P42261 906 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 ZNF140P52738 457 aaPredicted RBP16.69■□□□□ 0.26
CCDC38-203ENST00000546803 ITGA9Q13797 1035 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 POU6F1Q14863 301 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 PRRT3Q5FWE3 981 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 KLHL7Q8IXQ5 586 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 SLC25A45Q8N413 288 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 FSTL5Q8N475 847 aaPredicted RBP16.69■□□□□ 0.26
CCDC38-203ENST00000546803 ZNF548Q8NEK5 533 aaPredicted RBP16.69■□□□□ 0.26
CCDC38-203ENST00000546803 RHBDD1Q8TEB9 315 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 STYXQ8WUJ0 223 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 GLYATL1Q969I3 302 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 SCARF2Q96GP6 870 aaPredicted RBP16.69■□□□□ 0.26
CCDC38-203ENST00000546803 VPS35Q96QK1 796 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 RANBP9Q96S59 729 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 CDC6Q99741 560 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 PIH1D1Q9NWS0 290 aaKnown RBP16.69■□□□□ 0.26
CCDC38-203ENST00000546803 VPS18Q9P253 973 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 PCOLCE2Q9UKZ9 415 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 PNMA8BQ9ULN7 279 aaPredicted RBP16.69■□□□□ 0.26
CCDC38-203ENST00000546803 KCTD3Q9Y597 815 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 USP34Q70CQ2 3546 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 RALGAPA1Q6GYQ0 2036 aa16.69■□□□□ 0.26
CCDC38-203ENST00000546803 DMDP11532 3685 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 HEATR9A2RTY3 570 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 SCAMP1O15126 338 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 AQP9O43315 295 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 CBFA2T3O75081 653 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 SLC25A14O95258 325 aaPredicted RBP16.68■□□□□ 0.26
CCDC38-203ENST00000546803 ALPPL2P10696 532 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 CEACAM1P13688 526 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 ADRA1DP25100 572 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 PSMA3P25788 255 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 PTGIRP43119 386 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 NPY2RP49146 381 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 PTK6Q13882 451 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 SEPT6Q14141 434 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 DHX34Q14147 1143 aaKnown RBP16.68■□□□□ 0.26
CCDC38-203ENST00000546803 KCNJ11Q14654 390 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 PTPRCAPQ14761 206 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 ELOCQ15369 112 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 CHRNA6Q15825 494 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 LRRC8BQ6P9F7 803 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 FAM151BQ6UXP7 276 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 NLRP9Q7RTR0 991 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 RD3Q7Z3Z2 195 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 PHYKPLQ8IUZ5 450 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 RBFAQ8N0V3 343 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 MCUQ8NE86 351 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 SPATA4Q8NEY3 305 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 LMX1AQ8TE12 382 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 CPT1BQ92523 772 aa16.68■□□□□ 0.26
CCDC38-203ENST00000546803 PDXPQ96GD0 296 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms