RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 CD40LGP29965 261 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 ALDH7A1P49419 539 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 SERPINB9P50453 376 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 NME5P56597 212 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 DBPQ10586 325 aaPredicted RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 MERTKQ12866 999 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 DUSP7Q16829 419 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 Q5BKY6 102 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 C6orf10Q5SRN2 563 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 CATSPEREQ5SY80 951 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 N4BP2L1Q5TBK1 243 aaPredicted RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 ABRAXAS1Q6UWZ7 409 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 ZNF438Q7Z4V0 828 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 ACOT1Q86TX2 421 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 CPA6Q8N4T0 437 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 AFAP1L2Q8N4X5 818 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 PCDH20Q8N6Y1 951 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 AFG1LQ8WV93 481 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 HSFY1Q96LI6 401 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 CSPG4P5Q96PW8 444 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 FAM49BQ9NUQ9 324 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 PIH1D1Q9NWS0 290 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 MRPL39Q9NYK5 338 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 IFT80Q9P2H3 777 aaPredicted RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 AURKCQ9UQB9 309 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 E2F8A0AVK6 867 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 FAM25AB3EWG3 89 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 FAM25CB3EWG5 89 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 FAM25GB3EWG6 89 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 F5H423 210 aaPredicted RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 SLC22A1O15245 554 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 SLC4A1P02730 911 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 CNTFP26441 200 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 GTF2E2P29084 291 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 HCAR3P49019 387 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 PLA2G16P53816 162 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 POU5F1BQ06416 359 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 PIGFQ07326 219 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 GRSF1Q12849 480 aaKnown RBP eCLIP7.86□□□□□ -1.15
UBR1-202ENST00000546274 ZNF267Q14586 743 aaPredicted RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 SOWAHAQ2M3V2 549 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 PLEKHM3Q6ZWE6 761 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 PAGE2Q7Z2X7 111 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 CDH24Q86UP0 819 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 FAM9CQ8IZT9 166 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 PYROXD2Q8N2H3 581 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 SIMC1Q8NDZ2 872 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 OR6F1Q8NGZ6 308 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 SH3KBP1Q96B97 665 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 FUNDC2Q9BWH2 189 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 BEX2Q9BXY8 128 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 FAM124BQ9H5Z6 455 aaPredicted RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 TXNRD2Q9NNW7 524 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 XPNPEP3Q9NQH7 507 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 PDGFCQ9NRA1 345 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 TMLHEQ9NVH6 421 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 GGA3Q9NZ52 723 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 SUCOQ9UBS9 1254 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 GJD2Q9UKL4 321 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 FNDC1Q4ZHG4 1894 aaPredicted RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 DNAJC25-GNG10A0A024R161 153 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 A0A0B4J203 849 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 TRIM64BA6NI03 449 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 SLC9A3R1O14745 358 aaPredicted RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 HBP1O60381 514 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 SEC24AO95486 1093 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 ELK4P28324 431 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 RBP5P82980 135 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 ILF2Q12905 390 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 SMAD1Q15797 465 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 HMBOX1Q6NT76 420 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 ERAP2Q6P179 960 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 FIP1L1Q6UN15 594 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 METTL3Q86U44 580 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 MFSD4AQ8N468 514 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 NETO2Q8NC67 525 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 SLC22A8Q8TCC7 542 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 ST8SIA2Q92186 375 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 PGLYRP2Q96PD5 576 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 LGMNQ99538 433 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 NPAS2Q99743 824 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 REXO4Q9GZR2 422 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 DPEP3Q9H4B8 488 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 DHX35Q9H5Z1 703 aaKnown RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 WDR55Q9H6Y2 383 aaPredicted RBP7.86□□□□□ -1.15
UBR1-202ENST00000546274 BRD7Q9NPI1 651 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 IGSF5Q9NSI5 407 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 MORF4L1Q9UBU8 362 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 IPPQ9Y573 584 aa7.86□□□□□ -1.15
UBR1-202ENST00000546274 MICAL3Q7RTP6 2002 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 KRT87PA6NCN2 255 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 LINC01387J3KSC0 135 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 PDHXO00330 501 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 AP3D1O14617 1153 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 VTNP04004 478 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 PSKH1P11801 424 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 GOT1P17174 413 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 MYF6P23409 242 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 HAAOP46952 286 aa7.85□□□□□ -1.15
UBR1-202ENST00000546274 NR2C2P49116 596 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms