RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 EBLN1P0CF75 366 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 CYP2D6P10635 497 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ITGAMP11215 1152 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 PCP11498 1178 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 PDGFRAP16234 1089 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 GAP43P17677 238 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 LAG3P18627 525 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 HIST1H2ADP20671 130 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 DRD4P21917 467 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ZFP36P26651 326 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ACADLP28330 430 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 CHRNA5P30532 468 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 RYKP34925 604 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 RFC1P35251 1148 aaPredicted RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 IDUAP35475 653 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 FOLR3P41439 243 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ARSEP51690 589 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 YBEYP58557 167 aaPredicted RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 TAS2R40P59535 323 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 GRSF1Q12849 480 aaKnown RBP eCLIP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 RPA4Q13156 261 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 CBX3Q13185 183 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 CAPSQ13938 189 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 GALNT3Q14435 633 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 LASP1Q14847 261 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 LARS2Q15031 903 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 PTPN14Q15678 1187 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 HSPB2Q16082 182 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 KRT24Q2M2I5 525 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 CBWD6Q4V339 395 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 CBWD3Q5JTY5 395 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 PCID2Q5JVF3 399 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 KRT39Q6A163 491 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 FBXO42Q6P3S6 717 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 VSTM1Q6UX27 236 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 HIST3H2AQ7L7L0 130 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 DSG4Q86SJ6 1040 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 FAM217AQ8IXS0 508 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 TERB1Q8NA31 727 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 RBM15BQ8NDT2 890 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 OR4N2Q8NGD1 307 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 OR14L1PQ8NHC6 308 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 LILRB1Q8NHL6 650 aaPredicted RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 SPATA20Q8TB22 786 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 HDAC7Q8WUI4 952 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ZFPM2Q8WW38 1151 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 SEPT1Q8WYJ6 367 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ARSGQ96EG1 525 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 MYEOVQ96EZ4 313 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 PDLIM5Q96HC4 596 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 MXRA8Q9BRK3 442 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 AIFM2Q9BRQ8 373 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF747Q9BV97 191 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF341Q9BYN7 854 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 RTN4RQ9BZR6 473 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 TNMDQ9H2S6 317 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 SLC28A3Q9HAS3 691 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 CYP4F11Q9HBI6 524 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 MAGEE1Q9HCI5 957 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ASIC5Q9NY37 505 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ARMCX3Q9UH62 379 aaPredicted RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 DDX25Q9UHL0 483 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 PRDM4Q9UKN5 801 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 SLC8A2Q9UPR5 921 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 ABCC1P33527 1531 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 TNRQ92752 1358 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 SUPT6HQ7KZ85 1726 aaKnown RBP3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 PRXQ9BXM0 1461 aa3.98□□□□□ -1.77
SFSWAP-211ENST00000542813 RRBP1Q9P2E9 1410 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 KDM5DQ9BY66 1539 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 FAM135AQ9P2D6 1515 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 DEPDC5O75140 1603 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 KIF14Q15058 1648 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 HTR3EA5X5Y0 456 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 KRT87PA6NCN2 255 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 KDM4EB2RXH2 506 aaPredicted RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 KLRF2D3W0D1 207 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 CAPN9O14815 690 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ASAP2O43150 1006 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 KIF1CO43896 1103 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 SEC22BO75396 215 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 STAM2O75886 525 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 CELF2O95319 508 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 GCNT3O95395 438 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 OLFM2O95897 454 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 TTLL1O95922 423 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ZFYP08048 801 aaPredicted RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ACHEP22303 614 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 PTPN3P26045 913 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 KLRC2P26717 231 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 MAPK3P27361 379 aaPredicted RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 SHMT1P34896 483 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 SOX2P48431 317 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 CENPAP49450 140 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 SELENOPP49908 381 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 CLCNKBP51801 687 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 HSD17B7P56937 341 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 MRPS34P82930 218 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 KLF10Q13118 480 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 PPIGQ13427 754 aaKnown RBP eCLIP3.97□□□□□ -1.777e-13■□□□□ 9.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms