RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 TRADDQ15628 312 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 SMTNL2Q2TAL5 461 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 TRIM16LQ309B1 348 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 ANKRD20A4Q4UJ75 823 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 C4orf50Q6ZRC1 276 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 SETD3Q86TU7 594 aaPredicted RBP12.58□□□□□ -0.39
DDX55-206ENST00000539934 SRFBP1Q8NEF9 429 aaKnown RBP12.58□□□□□ -0.39
DDX55-206ENST00000539934 APOL6Q9BWW8 343 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 TNKS2Q9H2K2 1166 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 SEMA3GQ9NS98 782 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 EIF2B4Q9UI10 523 aaKnown RBP12.58□□□□□ -0.39
DDX55-206ENST00000539934 MBD1Q9UIS9 605 aaPredicted RBP12.58□□□□□ -0.39
DDX55-206ENST00000539934 HES2Q9Y543 173 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 CEPT1Q9Y6K0 416 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 DMXL1Q9Y485 3027 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 PDCD11Q14690 1871 aaKnown RBP12.58□□□□□ -0.4
DDX55-206ENST00000539934 F8W036 122 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 RAD51CO43502 376 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 MED7O43513 233 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 PSMG1O95456 288 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 INHBBP09529 407 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 ITGA4P13612 1032 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 ITGB6P18564 788 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 IL1RL1Q01638 556 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 NAB1Q13506 487 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 PON2Q15165 354 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 LTB4RQ15722 352 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 AANATQ16613 207 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 USP41Q3LFD5 358 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 HP1BP3Q5SSJ5 553 aaPredicted RBP12.58□□□□□ -0.4
DDX55-206ENST00000539934 INTS11Q5TA45 600 aaKnown RBP12.58□□□□□ -0.4
DDX55-206ENST00000539934 SMYD5Q6GMV2 418 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 C11orf88Q6PI97 169 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 CYP20A1Q6UW02 462 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 IZUMO2Q6UXV1 221 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 ADAT2Q7Z6V5 191 aaKnown RBP12.58□□□□□ -0.4
DDX55-206ENST00000539934 CPNE8Q86YQ8 564 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 ZNF619Q8N2I2 560 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 TMEM40Q8WWA1 233 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 CD101Q93033 1021 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 MRPL38Q96DV4 380 aaKnown RBP12.58□□□□□ -0.4
DDX55-206ENST00000539934 AHCYL2Q96HN2 611 aaKnown RBP12.58□□□□□ -0.4
DDX55-206ENST00000539934 SNX18Q96RF0 628 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 ZNF518BQ9C0D4 1074 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 SDCBP2Q9H190 292 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 IGFLR1Q9H665 355 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 EPB41L5Q9HCM4 733 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.4
DDX55-206ENST00000539934 INSL6Q9Y581 213 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 PCDHA3Q9Y5H8 950 aa12.58□□□□□ -0.4
DDX55-206ENST00000539934 ABHD14A-ACY1A0A1B0GW23 586 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 PRR23AA6NEV1 266 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 TBX10O75333 385 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 CRTAPO75718 401 aaPredicted RBP12.57□□□□□ -0.4
DDX55-206ENST00000539934 CXCL10P02778 98 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 SHBGP04278 402 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 CTSHP09668 335 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 MMP8P22894 467 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 CRYBB1P53674 252 aaPredicted RBP12.57□□□□□ -0.4
DDX55-206ENST00000539934 GPM6BQ13491 265 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 AADACL2Q6P093 401 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 PRMT9Q6P2P2 845 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 TRAF7Q6Q0C0 670 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 TAGAPQ8N103 731 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 FITM2Q8N6M3 262 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 TFAP2BQ92481 460 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 FRMD8Q9BZ67 464 aaPredicted RBP12.57□□□□□ -0.4
DDX55-206ENST00000539934 NXF3Q9H4D5 531 aaKnown RBP12.57□□□□□ -0.4
DDX55-206ENST00000539934 CYP3A43Q9HB55 503 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 GDF3Q9NR23 364 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 PARVAQ9NVD7 372 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 OR6C2Q9NZP2 312 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 PARP2Q9UGN5 583 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 CYTH4Q9UIA0 394 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 PCDHGC3Q9UN70 934 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 SCN1AP35498 2009 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 ZBTB24O43167 697 aaPredicted RBP12.57□□□□□ -0.4
DDX55-206ENST00000539934 RECQL4O94761 1208 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 MAOBP27338 520 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 LTBRP36941 435 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 THPOP40225 353 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
DDX55-206ENST00000539934 TPTEP56180 551 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 UBE3AQ05086 875 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 PTP4A2Q12974 167 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 ORC1Q13415 861 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 MAMLD1Q13495 774 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 KCNAB1Q14722 419 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 KHDC1Q4VXA5 237 aaKnown RBP12.57□□□□□ -0.4
DDX55-206ENST00000539934 PIK3R6Q5UE93 754 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 TAF2Q6P1X5 1199 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 UNC5AQ6ZN44 842 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 UTS2BQ765I0 119 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 MICAL3Q7RTP6 2002 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 CRYBG2Q8N1P7 616 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 METTL25Q8N6Q8 603 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 PRSS33Q8NF86 280 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 RAB3IL1Q8TBN0 382 aa12.57□□□□□ -0.4
DDX55-206ENST00000539934 MTBPQ96DY7 904 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms