RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 AGXT2Q9BYV1 514 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 BATF3Q9NR55 127 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 PSMD7P51665 324 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 MSANTD2Q6P1R3 559 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 CD101Q93033 1021 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 KLHL32Q96NJ5 620 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 PCDHB18PQ96TA0 734 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 LEF1Q9UJU2 399 aaPredicted RBP11.17□□□□□ -0.62
LINC00346-201ENST00000538077 B4DGG1 531 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 SPAM1P38567 509 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 ZNF460Q14592 562 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 BHLHB9Q6PI77 547 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 RNF31Q96EP0 1072 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 RIPOR3Q96MK2 946 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 FUCA2Q9BTY2 467 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 L1RE1Q9UN81 338 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 TIMM22Q9Y584 194 aa11.17□□□□□ -0.62
LINC00346-201ENST00000538077 PHLPP1O60346 1717 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 PEAK1Q9H792 1746 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 A0A1W2PRU2 124 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 GNB5O14775 395 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 SNPHO15079 494 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 CLDN11O75508 207 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 FGF1P05230 155 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 USP46P62068 366 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 FPGSQ05932 587 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 HSPB3Q12988 150 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 VARS2Q5ST30 1063 aaKnown RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 TAPT1Q6NXT6 567 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 METTL3Q86U44 580 aaKnown RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 GHDCQ8N2G8 530 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 SETD6Q8TBK2 473 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 PDCD10Q9BUL8 212 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 PAIP1Q9H074 479 aaKnown RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 COL20A1Q9P218 1284 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 KCNE2Q9Y6J6 123 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 SALL3Q9BXA9 1300 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 PRMT3O60678 531 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 CD48P09326 243 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 BMP7P18075 431 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 SLC6A2P23975 617 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 DGKEP52429 567 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 NR1D2Q14995 579 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 TEAD4Q15561 434 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 TSC22D1Q15714 1073 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 TATDN1Q6P1N9 297 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 RALGPS2Q86X27 583 aaPredicted RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 KCNK4Q9NYG8 393 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 CORO2BQ9UQ03 480 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 AFDNP55196 1824 aaKnown RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 DYTNA2CJ06 578 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 SOWAHBA6NEL2 793 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 QSOX1O00391 747 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 AZIN1O14977 448 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 CDK14O94921 469 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 IDSP22304 550 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 DGKGP49619 791 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 GPM6BQ13491 265 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 XKR4Q5GH76 650 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 KLHL35Q6PF15 583 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 TXNDC11Q6PKC3 985 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 ZBTB46Q86UZ6 589 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 DAW1Q8N136 415 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 SLC43A3Q8NBI5 491 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 CLEC4CQ8WTT0 213 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 AP2M1Q96CW1 435 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 RCN3Q96D15 328 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 TSSK3Q96PN8 268 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 EBNA1BP2Q99848 306 aaKnown RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 RACGAP1Q9H0H5 632 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 GLOD4Q9HC38 313 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 TBC1D14Q9P2M4 693 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 ENOPH1Q9UHY7 261 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 CPED1A4D0V7 1026 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 FOXO6A8MYZ6 492 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 H2AFXP16104 143 aaPredicted RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 MPSTP25325 297 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 TPP2P29144 1249 aaPredicted RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 PSME3P61289 254 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 NFATC2Q13469 925 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 GFOD2Q3B7J2 385 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 LSM12Q3MHD2 195 aaKnown RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 BRMS1LQ5PSV4 323 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 AMIGO2Q86SJ2 522 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 ADAMTSL2Q86TH1 951 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 GPR180Q86V85 440 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 KCNN2Q9H2S1 579 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 MARCH7Q9H992 704 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 L2HGDHQ9H9P8 463 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 DERAQ9Y315 318 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 C9JVG2 144 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 FPGTO14772 594 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 RBMXL2O75526 392 aaKnown RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 PRAMEF1O95521 474 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 C8AP07357 584 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 F7P08709 466 aaPredicted RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 KELP23276 732 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 ITGA3P26006 1051 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 ATXN1P54253 815 aaKnown RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 DGUOKQ16854 277 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms