RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 TRIM10Q9UDY6 481 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 CNOT6Q9ULM6 557 aaKnown RBP17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 SUFUQ9UMX1 484 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 MACROD2A1Z1Q3 448 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 GOLGA6CA6NDK9 693 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 GOLGA6BA6NDN3 693 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 NOBOXO60393 691 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 TCEA3O75764 348 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 TJP3O95049 919 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 GOLGA6DP0CG33 693 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 CETN2P41208 172 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 OTUD4Q01804 1114 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 PCSK7Q16549 785 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 PID1Q7Z2X4 250 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 TAF8Q7Z7C8 310 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 C17orf82Q86X59 251 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 CCL4L1Q8NHW4 92 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 PTCD2Q8WV60 388 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 GRAMD1AQ96CP6 724 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 NXPE2Q96DL1 559 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 HES6Q96HZ4 224 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 DEPDC7Q96QD5 511 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 ABCG4Q9H172 646 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 RAD18Q9NS91 495 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 GOLGA6AQ9NYA3 693 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 VPS18Q9P253 973 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 KLHL8Q9P2G9 620 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 ST14Q9Y5Y6 855 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 ADGRG1Q9Y653 693 aa17.1■□□□□ 0.33
SFSWAP-205ENST00000537164 NTN3O00634 580 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 DDX3YO15523 660 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 PMPCBO75439 489 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 ZNF189O75820 626 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 PNLIPP16233 465 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 RBL1P28749 1068 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 POLD2P49005 469 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 WNT3AP56704 352 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 CYP4F3Q08477 520 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 ILF3Q12906 894 aaKnown RBP eCLIP17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 MPP3Q13368 585 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 CCDC70Q6NSX1 233 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 KDELC2Q7Z4H8 507 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 UBL4BQ8N7F7 174 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 FAM46DQ8NEK8 389 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 OXNAD1Q96HP4 312 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 MRGPRX2Q96LB1 330 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 CCDC3Q9BQI4 270 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 GSDMCQ9BYG8 508 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 TRABDQ9H4I3 376 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 UBP1Q9NZI7 540 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 GULP1Q9UBP9 304 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 MOSPD1Q9UJG1 213 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 APPL1Q9UKG1 709 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 ZNF711Q9Y462 761 aa17.09■□□□□ 0.33
SFSWAP-205ENST00000537164 FADS2P1A8MWK0 482 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 H7C0C1 242 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 ARHGAP6O43182 974 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 RBP3P10745 1247 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 GLB1P16278 677 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 HMGCLP35914 325 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 ADCY8P40145 1251 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 GNPDA1P46926 289 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 ATP5OP48047 213 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 KLF1Q13351 362 aaPredicted RBP17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 PEX6Q13608 980 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 HLTFQ14527 1009 aaKnown RBP eCLIP17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 TCEA2Q15560 299 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 C14orf28Q4W4Y0 310 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 PYCR3Q53H96 274 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 CERCAMQ5T4B2 595 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 PDPK2PQ6A1A2 396 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 AADACL2Q6P093 401 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 GPR26Q8NDV2 337 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 DTX3LQ8TDB6 740 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 FERMT1Q9BQL6 677 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 GORASP1Q9BQQ3 440 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 ZSCAN5AQ9BUG6 496 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 TSGA10Q9BZW7 698 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 GBA3Q9H227 469 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 SPATS2LQ9NUQ6 558 aaKnown RBP17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 SIRPGQ9P1W8 387 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 SHOC2Q9UQ13 582 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 CAPN6Q9Y6Q1 641 aa17.08■□□□□ 0.32
SFSWAP-205ENST00000537164 URB1O60287 2271 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 UNC13CQ8NB66 2214 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 NUDT21O43809 227 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 DNAJC6O75061 913 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 FGF1P05230 155 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 PIRTP0C851 137 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 HLA-DPA1P20036 260 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 EIF3EP60228 445 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 CTBSQ01459 385 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 LRP8Q14114 963 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 SLC1A5Q15758 541 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 ISXQ2M1V0 245 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 SIRPB2Q5JXA9 342 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 ZNF662Q6ZS27 426 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 TRIM74Q86UV6 250 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 CDKL3Q8IVW4 592 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms