RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PDHBP11177 359 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 LYL1P12980 280 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 UBA1P22314 1058 aaKnown RBP5.74□□□□□ -1.49
CLIP1-207ENST00000536634 CHKAP35790 457 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 PRKAA2P54646 552 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 RHAGQ02094 409 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 CDK18Q07002 472 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 MGAT3Q09327 533 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 FOXO1Q12778 655 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 KCNC3Q14003 757 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 STXBP2Q15833 593 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 TIGD6Q17RP2 521 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 DGAT2L7PQ6IED9 249 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 SLC30A9Q6PML9 568 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 SYNE3Q6ZMZ3 975 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 ANKS1BQ7Z6G8 1248 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 GPSM1Q86YR5 675 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 KIAA2013Q8IYS2 634 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 TMEM217Q8N7C4 229 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 KBTBD3Q8NAB2 608 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 NSMCE1Q8WV22 266 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 CPT1BQ92523 772 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 APBB2Q92870 758 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 P2RX5Q93086 422 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 TMEM47Q9BQJ4 181 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 TLE6Q9H808 572 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 ARL15Q9NXU5 204 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 NDUFAF4Q9P032 175 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 RALYQ9UKM9 306 aaKnown RBP5.74□□□□□ -1.49
CLIP1-207ENST00000536634 DMXL2Q8TDJ6 3036 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 FANCMQ8IYD8 2048 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 IGF2RP11717 2491 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 TCRBV7S3A2A0A539 114 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 HMX3A6NHT5 357 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 FAM90A20PA6NIJ5 464 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 B4DLN1 442 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 IPO5O00410 1097 aaKnown RBP5.73□□□□□ -1.49
CLIP1-207ENST00000536634 RANBP6O60518 1105 aaKnown RBP5.73□□□□□ -1.49
CLIP1-207ENST00000536634 ZC3H11AO75152 810 aaKnown RBP eCLIP5.73□□□□□ -1.49
CLIP1-207ENST00000536634 EIF3JO75822 258 aaKnown RBP5.73□□□□□ -1.49
CLIP1-207ENST00000536634 GGPS1O95749 300 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 SYF2O95926 243 aaKnown RBP5.73□□□□□ -1.49
CLIP1-207ENST00000536634 LGALS2P05162 132 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 MRPL12P52815 198 aaKnown RBP5.73□□□□□ -1.49
CLIP1-207ENST00000536634 PMPCAQ10713 525 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 PDCLQ13371 301 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 LPIN1Q14693 890 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 PTGR1Q14914 329 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 DUSP6Q16828 381 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 ENTPD8Q5MY95 495 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 CELF3Q5SZQ8 465 aaKnown RBP5.73□□□□□ -1.49
CLIP1-207ENST00000536634 ERAP2Q6P179 960 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 KLBQ86Z14 1044 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 UBALD2Q8IYN6 164 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 PELI3Q8N2H9 469 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 ENDOVQ8N8Q3 282 aaKnown RBP5.73□□□□□ -1.49
CLIP1-207ENST00000536634 TMEM174Q8WUU8 243 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 ARRDC3Q96B67 414 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 ZNF419Q96HQ0 510 aaPredicted RBP5.73□□□□□ -1.49
CLIP1-207ENST00000536634 SPATA33Q96N06 139 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 IWS1Q96ST2 819 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 NAPBQ9H115 298 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 EBF3Q9H4W6 596 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 MAP6D1Q9H9H5 199 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 PXMP2Q9NR77 195 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 SETD4Q9NVD3 440 aa5.73□□□□□ -1.49
CLIP1-207ENST00000536634 GCN1Q92616 2671 aaKnown RBP5.72□□□□□ -1.49
CLIP1-207ENST00000536634 BPTFQ12830 3046 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 FLNBO75369 2602 aaKnown RBP5.72□□□□□ -1.49
CLIP1-207ENST00000536634 NPIPB13A6NJU9 1138 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 NPIPB5A8MRT5 1133 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 NPIPB4C9JG80 1138 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 KCNAB3O43448 404 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 GOLGA8HP0CJ92 632 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 SNHG28P0DPA3 235 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 TOP1P11387 765 aaKnown RBP5.72□□□□□ -1.49
CLIP1-207ENST00000536634 HOXB2P14652 356 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 PCP4P48539 62 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 TRAPPC10P48553 1259 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 CLCN5P51795 746 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 SEMA3AQ14563 771 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 ANGPT1Q15389 498 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 CDC37Q16543 378 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-207ENST00000536634 ARHGEF16Q5VV41 709 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 ANKRD54Q6NXT1 300 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 C9orf47Q6ZRZ4 202 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 RNF144BQ7Z419 303 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 KDELC2Q7Z4H8 507 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 CCDC105Q8IYK2 499 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 DCLK2Q8N568 766 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 CSGALNACT1Q8TDX6 532 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 ASB5Q8WWX0 329 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 INPP5DQ92835 1189 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 NEK1Q96PY6 1258 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 UBA5Q9GZZ9 404 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 POMKQ9H5K3 350 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 FZD3Q9NPG1 666 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 SLC22A11Q9NSA0 550 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 R4GN57 208 aa5.72□□□□□ -1.49
CLIP1-207ENST00000536634 DENND4AQ7Z401 1863 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms