RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 GSDMCQ9BYG8 508 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 DPH1Q9BZG8 443 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 TMEM168Q9H0V1 697 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 ABCG8Q9H221 673 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 CYP4F12Q9HCS2 524 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 MRPL40Q9NQ50 206 aaKnown RBP10.76□□□□□ -0.69
CCDC60-202ENST00000535685 GULP1Q9UBP9 304 aa10.76□□□□□ -0.69
CCDC60-202ENST00000535685 NOVA2Q9UNW9 492 aaKnown RBP10.76□□□□□ -0.69
CCDC60-202ENST00000535685 AKR1B15C9JRZ8 316 aaPredicted RBP10.75□□□□□ -0.69
CCDC60-202ENST00000535685 D6RAR5 112 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 LCA5LO95447 670 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 MMP2P08253 660 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 ITPKBP27987 946 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 GJC1P36383 396 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 CCL7P80098 99 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 TLE3Q04726 772 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 ZFP36L1Q07352 338 aaKnown RBP10.75□□□□□ -0.69
CCDC60-202ENST00000535685 ITKQ08881 620 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 ILF3Q12906 894 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC60-202ENST00000535685 PDK1Q15118 436 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 SOWAHCQ53LP3 525 aaPredicted RBP10.75□□□□□ -0.69
CCDC60-202ENST00000535685 RAET1GQ6H3X3 334 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 SPACA3Q8IXA5 215 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 CNTD1Q8N815 330 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 SNRNP27Q8WVK2 155 aaKnown RBP10.75□□□□□ -0.69
CCDC60-202ENST00000535685 TMEM159Q96B96 161 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 TADA1Q96BN2 335 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 AP2M1Q96CW1 435 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 COX14Q96I36 57 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 TMEM74Q96NL1 305 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 GFM1Q96RP9 751 aaKnown RBP10.75□□□□□ -0.69
CCDC60-202ENST00000535685 LRRN3Q9H3W5 708 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 PCDH9Q9HC56 1237 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 SPTLC3Q9NUV7 552 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 DDX56Q9NY93 547 aaKnown RBP10.75□□□□□ -0.69
CCDC60-202ENST00000535685 ACSL6Q9UKU0 697 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 SATB2Q9UPW6 733 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 CHKBQ9Y259 395 aa10.75□□□□□ -0.69
CCDC60-202ENST00000535685 KALRNO60229 2985 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 HELZ2Q9BYK8 2649 aaKnown RBP10.74□□□□□ -0.69
CCDC60-202ENST00000535685 LRRD1A4D1F6 860 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 ANKRD66B4E2M5 251 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 APOL1O14791 398 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 MAP3K6O95382 1288 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 JCHAINP01591 159 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 FGF1P05230 155 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 ITGA2BP08514 1039 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 CTPS1P17812 591 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 RBMS1P29558 406 aaKnown RBP10.74□□□□□ -0.69
CCDC60-202ENST00000535685 GPR3P46089 330 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 GPR1P46091 355 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 NR2C2P49116 596 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 EPHB1P54762 984 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 UCNP55089 124 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 KCNC4Q03721 635 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 SQSTM1Q13501 440 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 LRP8Q14114 963 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 PTPRRQ15256 657 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 CRTC2Q53ET0 693 aaPredicted RBP10.74□□□□□ -0.69
CCDC60-202ENST00000535685 C4orf48Q5BLP8 95 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 C3orf38Q5JPI3 329 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 BZW1Q7L1Q6 419 aaKnown RBP10.74□□□□□ -0.69
CCDC60-202ENST00000535685 SPRED1Q7Z699 444 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 CCNJLQ8IV13 435 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 RHOT1Q8IXI2 618 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 ARL14Q8N4G2 192 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 CCNYQ8ND76 341 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 CCL4L1Q8NHW4 92 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 IMP4Q96G21 291 aaKnown RBP10.74□□□□□ -0.69
CCDC60-202ENST00000535685 TRIB3Q96RU7 358 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 UBL7Q96S82 380 aaPredicted RBP10.74□□□□□ -0.69
CCDC60-202ENST00000535685 LGMNQ99538 433 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 ANP32EQ9BTT0 268 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 B3GNT4Q9C0J1 378 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 CDH19Q9H159 772 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 CARS2Q9HA77 564 aaKnown RBP10.74□□□□□ -0.69
CCDC60-202ENST00000535685 SPATS2LQ9NUQ6 558 aaKnown RBP10.74□□□□□ -0.69
CCDC60-202ENST00000535685 TAAR2Q9P1P5 351 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 SIRPGQ9P1W8 387 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 VPS18Q9P253 973 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 NFKBIL1Q9UBC1 381 aaPredicted RBP10.74□□□□□ -0.69
CCDC60-202ENST00000535685 SUFUQ9UMX1 484 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 PCDHGA7Q9Y5G6 932 aa10.74□□□□□ -0.69
CCDC60-202ENST00000535685 ATMQ13315 3056 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 A0A0A6YYK5 440 aaPredicted RBP10.73□□□□□ -0.69
CCDC60-202ENST00000535685 TEX51A0A1B0GUA7 166 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 PPP1R12AO14974 1030 aaPredicted RBP10.73□□□□□ -0.69
CCDC60-202ENST00000535685 ZW10O43264 779 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 PSTPIP1O43586 416 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 RPLP0P05388 317 aaKnown RBP10.73□□□□□ -0.69
CCDC60-202ENST00000535685 ADCY8P40145 1251 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 SPINT3P49223 89 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 INHBCP55103 352 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 B4GALNT1Q00973 533 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 CTBSQ01459 385 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 ZBTB17Q13105 803 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 PYCR3Q53H96 274 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 ZFYVE27Q5T4F4 411 aa10.73□□□□□ -0.69
CCDC60-202ENST00000535685 HENMT1Q5T8I9 393 aaKnown RBP10.73□□□□□ -0.69
CCDC60-202ENST00000535685 TMEM164Q5U3C3 297 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms