RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TRMT61B	Q9BVS5	477 aa	Known RBP	4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CDCP1	Q9H5V8	836 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SH2D4A	Q9H788	454 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	IL21R	Q9HBE5	538 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	DUSP22	Q9NRW4	184 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RNF146	Q9NTX7	359 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SWAP70	Q9UH65	585 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	BAG5	Q9UL15	447 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	HSF4	Q9ULV5	492 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	VPS4A	Q9UN37	437 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	WNK1	Q9H4A3	2382 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MYLK	Q15746	1914 aa		4.76	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ITIH6	Q6UXX5	1313 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FOCAD	Q5VW36	1801 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3D	A0A087WVF3	549 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3I	A0A087WXS9	549 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3E	A0A087X179	549 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3K	A0A087X1G2	549 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3B	A6NDS4	549 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PRSS47	A8MTI9	375 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3L	B9A6J9	549 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TNFSF14	O43557	240 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ATG13	O75143	517 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	KAT7	O95251	611 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GLUD1	P00367	558 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LDLR	P01130	860 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GH1	P01241	217 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LDHC	P07864	332 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	DLD	P09622	509 aa	Known RBP	4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3H	P0C7X1	549 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SMIM10L2A	P0DMW4	78 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SMIM10L2B	P0DMW5	78 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FPR3	P25089	353 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PTGS2	P35354	604 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TAS2R50	P59544	299 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZSCAN23	Q3MJ62	389 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CBWD5	Q5RIA9	395 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TMEM198	Q66K66	360 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3G	Q6DHY5	549 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3C	Q6IPX1	549 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ACAD10	Q6JQN1	1059 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZUFSP	Q96AP4	578 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ARRDC3	Q96B67	414 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ELSPBP1	Q96BH3	223 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MSANTD3	Q96H12	275 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	NPAS1	Q99742	590 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LZTS2	Q9BRK4	669 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ELOVL1	Q9BW60	279 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FSD1L	Q9BXM9	530 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TRPV5	Q9NQA5	729 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TLR8	Q9NR97	1041 aa	Known RBP	4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	BLOC1S4	Q9NUP1	217 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SYBU	Q9NX95	663 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZDHHC7	Q9NXF8	308 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	AATF	Q9NY61	560 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CYP39A1	Q9NYL5	469 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TBX20	Q9UMR3	447 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ARHGAP26	Q9UNA1	814 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	BTBD3	Q9Y2F9	522 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CYP46A1	Q9Y6A2	500 aa		4.75	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.75	□□□□□ -1.65	6e-8	■■■■□ 24.3
ECHDC1-223	ENST00000534442	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ESYT2	A0FGR8	921 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SERINC4	A6NH21	518 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SPECC1L-ADORA2A	F8WAN1	911 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442		H0YIZ8	118 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GRID2	O43424	1007 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	DHX16	O60231	1041 aa	Known RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CYP3A7	P24462	503 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GALNS	P34059	522 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	JAK3	P52333	1124 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MLLT10	P55197	1068 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CASP6	P55212	293 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	HDAC4	P56524	1084 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RIPK4	P57078	832 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GSTO1	P78417	241 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TXNL4A	P83876	142 aa	Known RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CCDC15	Q0P6D6	951 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	EFEMP1	Q12805	493 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FOXE3	Q13461	319 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TUBA3C	Q13748	450 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CBFB	Q13951	182 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RNASE12	Q5GAN4	147 aa	Known RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LY6G5C	Q5SRR4	150 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	L1TD1	Q5T7N2	865 aa	Known RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	KAZN	Q674X7	775 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TUBA3E	Q6PEY2	450 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	KYAT3	Q6YP21	454 aa	Known RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PEG10	Q86TG7	708 aa	Known RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ABHD11	Q8NFV4	315 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RFFL	Q8WZ73	363 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LINC00476	Q8WZB0	136 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	NSUN4	Q96CB9	384 aa	Known RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZBTB10	Q96DT7	871 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RNF125	Q96EQ8	232 aa		4.74	□□□□□ -1.65

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