RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 ZCCHC8Q6NZY4 707 aaKnown RBP14.96□□□□□ -0.01
CPSF1-208ENST00000532560 SLCO6A1Q86UG4 719 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 SLC35F6Q8N357 371 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 ADAMTS14Q8WXS8 1223 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 LRRC45Q96CN5 670 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 COX14Q96I36 57 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 HIC2Q96JB3 615 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 TBL1YQ9BQ87 522 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 ZSCAN5AQ9BUG6 496 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 TRMT1Q9NXH9 659 aaKnown RBP14.96□□□□□ -0.01
CPSF1-208ENST00000532560 FEZ2Q9UHY8 353 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-208ENST00000532560 WASF3Q9UPY6 502 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 SLC17A4Q9Y2C5 497 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 PCDHGA1Q9Y5H4 931 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 FADS2P1A8MWK0 482 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 AGTP01019 485 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 CEACAM5P06731 702 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 IVLP07476 585 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 ANXA6P08133 673 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 CTSEP14091 401 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 BPIP17213 487 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 CKMT2P17540 419 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 SHC2P98077 582 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 DNAJC3Q13217 504 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 PDPK2PQ6A1A2 396 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 LVRNQ6Q4G3 990 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 RD3Q7Z3Z2 195 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 GLT6D1Q7Z4J2 308 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 RAB44Q7Z6P3 723 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-208ENST00000532560 RASGEF1CQ8N431 466 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 TRAM1L1Q8N609 369 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 GPR26Q8NDV2 337 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 BLOC1S5Q8TDH9 187 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 PBKQ96KB5 322 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 PLEKHG4BQ96PX9 1271 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 BOCQ9BWV1 1114 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 LRRC40Q9H9A6 602 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 MRPL40Q9NQ50 206 aaKnown RBP14.95□□□□□ -0.02
CPSF1-208ENST00000532560 NCKIPSDQ9NZQ3 722 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 ZNF148Q9UQR1 794 aa14.95□□□□□ -0.02
CPSF1-208ENST00000532560 LY6G6EA0A0G2JKS1 128 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 USP27XA6NNY8 438 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 PPFIA2O75334 1257 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 RFPL3O75679 317 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 METTL18O95568 372 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 IFNB1P01574 187 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 ATP1A1P05023 1023 aaKnown RBP14.94□□□□□ -0.02
CPSF1-208ENST00000532560 CELA2BP08218 269 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-208ENST00000532560 CDK4P11802 303 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 CKMT1AP12532 417 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 ACP1P24666 158 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 ACTN2P35609 894 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 FOXC1Q12948 553 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 ILKQ13418 452 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 OLIG2Q13516 323 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 C1orf61Q13536 156 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 SNX1Q13596 522 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 LONRF2Q1L5Z9 754 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 DEFB133Q30KQ1 61 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 C6orf132Q5T0Z8 1188 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 ZDHHC20Q5W0Z9 365 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 ALS2CLQ60I27 953 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 TRIM74Q86UV6 250 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 GKN2Q86XP6 184 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 KIF18AQ8NI77 898 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 DTX3LQ8TDB6 740 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 SCARF2Q96GP6 870 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-208ENST00000532560 APOLD1Q96LR9 279 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 C16orf45Q96MC5 204 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-208ENST00000532560 SPATA16Q9BXB7 569 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 CARS2Q9HA77 564 aaKnown RBP14.94□□□□□ -0.02
CPSF1-208ENST00000532560 ARNT2Q9HBZ2 717 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 CYP4F12Q9HCS2 524 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 HOMER3Q9NSC5 361 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 EVA1BQ9NVM1 165 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 IL17CQ9P0M4 197 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 VPS18Q9P253 973 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 CNOT6Q9ULM6 557 aaKnown RBP14.94□□□□□ -0.02
CPSF1-208ENST00000532560 TTC7AQ9ULT0 858 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-208ENST00000532560 DRG1Q9Y295 367 aaKnown RBP14.94□□□□□ -0.02
CPSF1-208ENST00000532560 U3KQA8 63 aa14.94□□□□□ -0.02
CPSF1-208ENST00000532560 ERI2A8K979 691 aaKnown RBP14.93□□□□□ -0.02
CPSF1-208ENST00000532560 INPP4BO15327 924 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 YY2O15391 372 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 PSMD3O43242 534 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 USP12O75317 370 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 AP2A1O95782 977 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 FDFT1P37268 417 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 DAB2P98082 770 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 MSLNQ13421 630 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-208ENST00000532560 TAF1AQ15573 450 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-208ENST00000532560 DENND5AQ6IQ26 1287 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 DOK6Q6PKX4 331 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 PNPLA1Q8N8W4 532 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 CCDC89Q8N998 374 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 SCG3Q8WXD2 468 aaKnown RBP14.93□□□□□ -0.02
CPSF1-208ENST00000532560 APOL2Q9BQE5 337 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 TMEM168Q9H0V1 697 aa14.93□□□□□ -0.02
CPSF1-208ENST00000532560 TRNAU1APQ9NX07 287 aaKnown RBP14.93□□□□□ -0.02
CPSF1-208ENST00000532560 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms