RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 RGSL1A5PLK6 1076 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 FAM221BA6H8Z2 402 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 C5orf60A6NFR6 353 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 C1QTNF9BB2RNN3 333 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 C1QTNF9P0C862 333 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 BPIP17213 487 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 GNPDA1P46926 289 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 C6orf132Q5T0Z8 1188 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 GUSBP11Q6P575 273 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 CCNI2Q6ZMN8 369 aaPredicted RBP17.32■□□□□ 0.36
CTSB-223ENST00000532370 MARK2Q7KZI7 788 aaKnown RBP17.32■□□□□ 0.36
CTSB-223ENST00000532370 TAF8Q7Z7C8 310 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 RAVER1Q8IY67 606 aaKnown RBP17.32■□□□□ 0.36
CTSB-223ENST00000532370 C1orf54Q8WWF1 131 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 COX14Q96I36 57 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 TMEM121BQ9BXQ6 578 aaPredicted RBP17.32■□□□□ 0.36
CTSB-223ENST00000532370 GULP1Q9UBP9 304 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 GPR34Q9UPC5 381 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 DOLKQ9UPQ8 538 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 PCYT1BQ9Y5K3 369 aaPredicted RBP17.32■□□□□ 0.36
CTSB-223ENST00000532370 ST14Q9Y5Y6 855 aa17.32■□□□□ 0.36
CTSB-223ENST00000532370 OAS3Q9Y6K5 1087 aaKnown RBP17.32■□□□□ 0.36
CTSB-223ENST00000532370 TP53BP1Q12888 1972 aaPredicted RBP17.31■□□□□ 0.36
CTSB-223ENST00000532370 CPED1A4D0V7 1026 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 CASC3O15234 703 aaKnown RBP17.31■□□□□ 0.36
CTSB-223ENST00000532370 BUD23O43709 281 aaKnown RBP17.31■□□□□ 0.36
CTSB-223ENST00000532370 ANXA9O76027 345 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 ATP1A1P05023 1023 aaKnown RBP17.31■□□□□ 0.36
CTSB-223ENST00000532370 ADRA1AP35348 466 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 GEMP55040 296 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 SPARCL1Q14515 664 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 GSE1Q14687 1217 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 NR0B2Q15466 257 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 GKN2Q86XP6 184 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 NRROSQ86YC3 692 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 TTC30BQ8N4P2 665 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 TAB3Q8N5C8 712 aaPredicted RBP17.31■□□□□ 0.36
CTSB-223ENST00000532370 KYQ8NBH2 561 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 TRIM58Q8NG06 486 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 BLOC1S5Q8TDH9 187 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 GATA6Q92908 595 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 SPATA16Q9BXB7 569 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 FSD1LQ9BXM9 530 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 ARFGAP3Q9NP61 516 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 PLEKHM1Q9Y4G2 1056 aa17.31■□□□□ 0.36
CTSB-223ENST00000532370 LIASO43766 372 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 USP12O75317 370 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 METTL18O95568 372 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 HLA-DPA1P20036 260 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 TNNT3P45378 269 aaPredicted RBP17.3■□□□□ 0.36
CTSB-223ENST00000532370 INSM1Q01101 510 aaPredicted RBP17.3■□□□□ 0.36
CTSB-223ENST00000532370 ILKQ13418 452 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 PRPSAP1Q14558 356 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 ZNF648Q5T619 568 aaPredicted RBP17.3■□□□□ 0.36
CTSB-223ENST00000532370 HES3Q5TGS1 186 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 LVRNQ6Q4G3 990 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 RANBP10Q6VN20 620 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 EFL1Q7Z2Z2 1120 aaKnown RBP17.3■□□□□ 0.36
CTSB-223ENST00000532370 FAM46DQ8NEK8 389 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 IFI44Q8TCB0 444 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 UBE2Q2Q8WVN8 375 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 SCG3Q8WXD2 468 aaKnown RBP17.3■□□□□ 0.36
CTSB-223ENST00000532370 SCARF2Q96GP6 870 aaPredicted RBP17.3■□□□□ 0.36
CTSB-223ENST00000532370 CARD9Q9H257 536 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 AAR2Q9Y312 384 aaKnown RBP17.3■□□□□ 0.36
CTSB-223ENST00000532370 PRKAB1Q9Y478 270 aa17.3■□□□□ 0.36
CTSB-223ENST00000532370 COL5A1P20908 1838 aaPredicted RBP17.3■□□□□ 0.36
CTSB-223ENST00000532370 TDRD6O60522 2096 aaKnown RBP17.3■□□□□ 0.36
CTSB-223ENST00000532370 ASMTLO95671 621 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 FGF1P05230 155 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 PYGLP06737 847 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 IVLP07476 585 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 AK4P27144 223 aaPredicted RBP17.29■□□□□ 0.36
CTSB-223ENST00000532370 CXCR5P32302 372 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 ADCY8P40145 1251 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 DUSP3P51452 185 aaPredicted RBP17.29■□□□□ 0.36
CTSB-223ENST00000532370 SNX1Q13596 522 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 PTPRCAPQ14761 206 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 SIX1Q15475 284 aaPredicted RBP17.29■□□□□ 0.36
CTSB-223ENST00000532370 OASLQ15646 514 aaKnown RBP17.29■□□□□ 0.36
CTSB-223ENST00000532370 PERM1Q5SV97 790 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 ARHGEF18Q6ZSZ5 1173 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 PRUNE1Q86TP1 453 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 REXO1L1PQ8IX06 675 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 GALNT15Q8N3T1 639 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 ARL10Q8N8L6 244 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 GPBAR1Q8TDU6 330 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 SRPK1Q96SB4 655 aaKnown RBP17.29■□□□□ 0.36
CTSB-223ENST00000532370 TRABDQ9H4I3 376 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 SPATS2LQ9NUQ6 558 aaKnown RBP17.29■□□□□ 0.36
CTSB-223ENST00000532370 PADI4Q9UM07 663 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 GPSM3Q9Y4H4 160 aa17.29■□□□□ 0.36
CTSB-223ENST00000532370 CELSR3Q9NYQ7 3312 aa17.28■□□□□ 0.36
CTSB-223ENST00000532370 EME2A4GXA9 379 aaPredicted RBP17.28■□□□□ 0.36
CTSB-223ENST00000532370 OPA1O60313 960 aa17.28■□□□□ 0.36
CTSB-223ENST00000532370 CDK4P11802 303 aa17.28■□□□□ 0.36
CTSB-223ENST00000532370 JUPP14923 745 aa17.28■□□□□ 0.36
CTSB-223ENST00000532370 HMGCLP35914 325 aa17.28■□□□□ 0.36
CTSB-223ENST00000532370 DCDC1P59894 354 aa17.28■□□□□ 0.36
CTSB-223ENST00000532370 CTBSQ01459 385 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms