RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TPD52P55327 224 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 EIF6P56537 245 aaKnown RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 VBP1P61758 197 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 RPS6P62753 249 aaKnown RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 NKX3-2P78367 333 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 TFDP2Q14188 446 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 ACAP2Q15057 778 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 PLEKHG6Q3KR16 790 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 GPAT3Q53EU6 434 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 TRAF7Q6Q0C0 670 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 PRR23BQ6ZRT6 265 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 LIMS2Q7Z4I7 341 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 TMEM161BQ8NDZ6 487 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 OR7D4Q8NG98 312 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 TMCO6Q96DC7 493 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 LGALS12Q96DT0 336 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 MFSD3Q96ES6 412 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 OPALINQ96PE5 141 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 CYP2S1Q96SQ9 504 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 ZSCAN5AQ9BUG6 496 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 NMRAL1Q9HBL8 299 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 LRRC4Q9HBW1 653 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 MAT2BQ9NZL9 334 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 KCNH4Q9UQ05 1017 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 DICER1Q9UPY3 1922 aaKnown RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 TSC2P49815 1807 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 H0Y626 953 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 ANGPT2O15123 496 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 ITGB3P05106 788 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 SLURP2P0DP57 97 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 PGAM1P18669 254 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 CHRM3P20309 590 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 GRIA4P48058 902 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 SERPINH1P50454 418 aaKnown RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 RHAGQ02094 409 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 MGAT3Q09327 533 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 FAPQ12884 760 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 GNA13Q14344 377 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 PCM1Q15154 2024 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 AAK1Q2M2I8 961 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 BRDTQ58F21 947 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 NXNL2Q5VZ03 156 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 TBPL2Q6SJ96 375 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF517Q6ZMY9 492 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 TAS1R3Q7RTX0 852 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 SPPL2CQ8IUH8 684 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 RIMKLAQ8IXN7 391 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 PLD6Q8N2A8 252 aaKnown RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 OR4M1Q8NGD0 313 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 RORBQ92753 470 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 PHOX2BQ99453 314 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 RBBP8Q99708 897 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 ADNPQ9H2P0 1102 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 SOX17Q9H6I2 414 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 NGRNQ9NPE2 291 aaKnown RBP8.11□□□□□ -1.11
CSDE1-214ENST00000530886 ATP6V1HQ9UI12 483 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 KLHL21Q9UJP4 597 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 GGA1Q9UJY5 639 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 PCDHGB6Q9Y5F9 930 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 PCDHGA10Q9Y5H3 936 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 SRCAPQ6ZRS2 3230 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 PNMA8CA0A1B0GUJ8 204 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 LINC00854A0A1B0GVQ3 168 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 UPK1AO00322 258 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ARPC2O15144 300 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ATG13O75143 517 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 LTFP02788 710 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 SBK3P0C264 359 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 SUPT20HL2P0C7V6 817 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 PTX3P26022 381 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 MAGEA11P43364 429 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 LIMK2P53671 638 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 CUL2Q13617 745 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 CTU2Q2VPK5 515 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 COLEC12Q5KU26 742 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 RAB43Q86YS6 212 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 SLC22A15Q8IZD6 547 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 TNS4Q8IZW8 715 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 TP53I13Q8NBR0 393 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 SPPL2BQ8TCT7 592 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 KAT8Q9H7Z6 458 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 IARS2Q9NSE4 1012 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 FAM118AQ9NWS6 357 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 MORF4L1Q9UBU8 362 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 TRMT6Q9UJA5 497 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 PCDHB3Q9Y5E6 796 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 KCNE2Q9Y6J6 123 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 INO80B-WBP1J3KQ70 363 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 USP12O75317 370 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 LYPLA2O95372 231 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 APRTP07741 180 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 IL7RP16871 459 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 CD6P30203 668 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 RARRES1P49788 294 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 CXCR4P61073 352 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ISL1P61371 349 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 CCNA1P78396 465 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF33BQ06732 778 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 HSDL1Q3SXM5 330 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms