RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 LSM8O95777 96 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 SLC9A1P19634 815 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 EPHB2P29323 1055 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 PER3P56645 1201 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 RPS15P62841 145 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 NFATC2Q13469 925 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 KIR2DS5Q14953 304 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 ZXDCQ2QGD7 858 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 CCDC14Q49A88 953 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 CPZQ66K79 652 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 ADAMTSL4Q6UY14 1074 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 BPHLQ86WA6 291 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 PPP1R3BQ86XI6 285 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 TSEN2Q8NCE0 465 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 SMARCE1Q969G3 411 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 BARD1Q99728 777 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 HERPUD2Q9BSE4 406 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 MFRPQ9BY79 579 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 MAGEB5Q9BZ81 275 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 CATSPERBQ9H7T0 1116 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 PLCB1Q9NQ66 1216 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 C5AR2Q9P296 337 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 B4GALT6Q9UBX8 382 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 LNPEPQ9UIQ6 1025 aa11.53□□□□□ -0.56
AMBRA1-207ENST00000529553 HIVEP1P15822 2718 aa11.52□□□□□ -0.56
AMBRA1-207ENST00000529553 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 ARGFXA6NJG6 315 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 GOLGA8SH3BPF8 625 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 J3KR12 359 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 KRT86O43790 486 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 HEXIM1O94992 359 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 EML2O95834 649 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 PYGLP06737 847 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 SDC4P31431 198 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 VIPR1P32241 457 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 ETV3P41162 512 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 PTPN9P43378 593 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 RFTN1Q14699 578 aaPredicted RBP11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 CNGA3Q16281 694 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 RAET1GQ6H3X3 334 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 GBP6Q6ZN66 633 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 SLFN11Q7Z7L1 901 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 GALNT13Q8IUC8 556 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 FAM71AQ8IYT1 594 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 PAF1Q8N7H5 531 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 GLIS1Q8NBF1 620 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 RXFP2Q8WXD0 754 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 RANBP9Q96S59 729 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 SMAD5Q99717 465 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 CRACR2AQ9BSW2 395 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 SCAND2PQ9GZW5 306 aaPredicted RBP11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 LRRC19Q9H756 370 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 ASF1BQ9NVP2 202 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 FARSAQ9Y285 508 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 TMEM98Q9Y2Y6 226 aa11.52□□□□□ -0.57
AMBRA1-207ENST00000529553 GTPBP10A4D1E9 387 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 FGF10O15520 208 aaPredicted RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 HTRA2O43464 458 aaPredicted RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 PALMO75781 387 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 CYP2A6P11509 494 aaPredicted RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 CYP11B1P15538 503 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 MAPK9P45984 424 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 GPR1P46091 355 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 RGRP47804 291 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 AP1S1P61966 158 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 SH3BP2P78314 561 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 CHAF1BQ13112 559 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 LAMB3Q13751 1172 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 ZRSR2Q15696 482 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 CDO1Q16878 200 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 EXOC3L4Q17RC7 722 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 C15orf59Q2T9L4 293 aaPredicted RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 PLEKHN1Q494U1 663 aaPredicted RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 RAB6CQ53S08 254 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 MED25Q71SY5 747 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 TECPR1Q7Z6L1 1165 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 CISD2Q8N5K1 135 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 EMC1Q8N766 993 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 FDCSPQ8NFU4 85 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 KLHL6Q8WZ60 621 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 RAB6CQ9H0N0 254 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 PDE7BQ9NP56 450 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 LUZP4Q9P127 313 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 CPNE7Q9UBL6 633 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 CNOT8Q9UFF9 292 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 TBC1D29Q9UFV1 150 aa11.51□□□□□ -0.57
AMBRA1-207ENST00000529553 CELSR1Q9NYQ6 3014 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 C2CD4BA6NLJ0 364 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 SOCS5O75159 536 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 FGFR1OPO95684 399 aaKnown RBP11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 F3P13726 295 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 PON1P27169 355 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 HTR7P34969 479 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 RENBPP51606 427 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 HDAC4P56524 1084 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 PDE1BQ01064 536 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 CRB2Q5IJ48 1285 aa11.5□□□□□ -0.57
AMBRA1-207ENST00000529553 DOK6Q6PKX4 331 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms