RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 KIAA1324Q6UXG2 1013 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 WDR88Q6ZMY6 472 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 C11orf57Q6ZUT1 292 aaPredicted RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 TAOK1Q7L7X3 1001 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 GSTA5Q7RTV2 222 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 LRRC70Q7Z2Q7 622 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 CUZD1Q86UP6 607 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ERO1BQ86YB8 467 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ZNF280BQ86YH2 543 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 CD302Q8IX05 232 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ARFGAP2Q8N6H7 521 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.49□□□□□ -1.69
CD44-213ENST00000525209 GBP7Q8N8V2 638 aaPredicted RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 L3MBTL4Q8NA19 623 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 C11orf65Q8NCR3 313 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 OR10S1Q8NGN2 331 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 OR9A1PQ8NGU1 263 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 OR2T3Q8NH03 318 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 C9orf43Q8TAL5 461 aaPredicted RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 ROBO4Q8WZ75 1007 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 OVCA2Q8WZ82 227 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 LRRC45Q96CN5 670 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 SNRNP40Q96DI7 357 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 RNF31Q96EP0 1072 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 PGM2Q96G03 612 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 VCPIP1Q96JH7 1222 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 PHACTR3Q96KR7 559 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 C7orf34Q96L11 122 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 PLEKHG4BQ96PX9 1271 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 HIST1H2AAQ96QV6 131 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 TRIB1Q96RU8 372 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 JMJD8Q96S16 334 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 UBL7Q96S82 380 aaPredicted RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 NPAS1Q99742 590 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 S1PR5Q9H228 398 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 VCX2Q9H322 139 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 EXO5Q9H790 373 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ANKZF1Q9H8Y5 726 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 CNOT10Q9H9A5 744 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 RPF1Q9H9Y2 349 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 KCNK9Q9NPC2 374 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 PPANQ9NQ55 473 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 BARHL2Q9NY43 387 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 ABI3Q9P2A4 366 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 IL17BQ9UHF5 180 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 SLC23A1Q9UHI7 598 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 DDX25Q9UHL0 483 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 FBXW11Q9UKB1 542 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 TSPAN16Q9UKR8 245 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 RAB21Q9UL25 225 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 PALD1Q9ULE6 856 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 CDC14AQ9UNH5 594 aa4.49□□□□□ -1.69
CD44-213ENST00000525209 EXO1Q9UQ84 846 aaKnown RBP4.49□□□□□ -1.69
CD44-213ENST00000525209 RIMS1Q86UR5 1692 aaKnown RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 NCAPD2Q15021 1401 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 ERICH3Q5RHP9 1530 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3DA0A087WVF3 549 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3IA0A087WXS9 549 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3EA0A087X179 549 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3KA0A087X1G2 549 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3BA6NDS4 549 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3FA6NER0 549 aaPredicted RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 GNAT3A8MTJ3 354 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3LB9A6J9 549 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 SNAP23O00161 211 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 YKT6O15498 198 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TTI1O43156 1089 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 HCRTR2O43614 444 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TLX2O43763 284 aaPredicted RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 NME6O75414 186 aaPredicted RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 ECI2O75521 394 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CH25HO95992 272 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 BCL10O95999 233 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 LCATP04180 440 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 YES1P07947 543 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CHRM4P08173 479 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CYP3A4P08684 503 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 INHBBP09529 407 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3HP0C7X1 549 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 EPB41P11171 864 aaKnown RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 RALBP11234 206 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 ARSAP15289 507 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CKMT2P17540 419 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 NR1D1P20393 614 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CTNNA2P26232 953 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 RPL10P27635 214 aaKnown RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 SERPINB6P35237 376 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 SLC16A2P36021 539 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CAPGP40121 348 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 PREPP48147 710 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 PLTPP55058 493 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 OXCT1P55809 520 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 SLC8A3P57103 927 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 ITIH3Q06033 890 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CUL1Q13616 776 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 BYSLQ13895 437 aaKnown RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 SLC39A14Q15043 492 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 IQCB1Q15051 598 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 PTPAQ15257 358 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 RBBP5Q15291 538 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms