RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 IPO7O95373 1038 aaKnown RBP18.45■□□□□ 0.54
CAPN1-203ENST00000525013 SLC4A1P02730 911 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 FGF1P05230 155 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 PIRTP0C851 137 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 PECAM1P16284 738 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-203ENST00000525013 SPINT3P49223 89 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 PDX1P52945 283 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 MAZP56270 477 aaKnown RBP18.45■□□□□ 0.54
CAPN1-203ENST00000525013 PCBP4P57723 403 aaKnown RBP18.45■□□□□ 0.54
CAPN1-203ENST00000525013 CTBSQ01459 385 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 HLTFQ14527 1009 aaKnown RBP eCLIP18.45■□□□□ 0.54
CAPN1-203ENST00000525013 TAZQ16635 292 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 TEX44Q53QW1 395 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 TFDP3Q5H9I0 405 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 CCDC70Q6NSX1 233 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 LYSMD3Q7Z3D4 306 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 B3GNT8Q7Z7M8 397 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 DAAM2Q86T65 1068 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 TMTC1Q8IUR5 882 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 KATNAL2Q8IYT4 538 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 RCOR2Q8IZ40 523 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 WDR36Q8NI36 951 aaKnown RBP18.45■□□□□ 0.54
CAPN1-203ENST00000525013 P3H4Q92791 437 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 OR2M4Q96R27 311 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 CDH19Q9H159 772 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 FAM83DQ9H4H8 585 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 GLOD4Q9HC38 313 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 EPB41L5Q9HCM4 733 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 THSD1Q9NS62 852 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 APPL1Q9UKG1 709 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 PLEKHM1Q9Y4G2 1056 aa18.45■□□□□ 0.54
CAPN1-203ENST00000525013 CCDC187A0A096LP49 1063 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 PMS2P1A4D2B8 440 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 SOWAHDA6NJG2 315 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 NUDT21O43809 227 aaKnown RBP18.44■□□□□ 0.54
CAPN1-203ENST00000525013 PMPCBO75439 489 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 PTPN3P26045 913 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ACTR1BP42025 376 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 MARCKSL1P49006 195 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 NAP1L1P55209 391 aaKnown RBP18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ERVPABLB-1P60509 514 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ACTR1AP61163 376 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 CDK18Q07002 472 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 PEX6Q13608 980 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 PRKD1Q15139 912 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-203ENST00000525013 C11orf63Q6NUN7 778 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ZC3H18Q86VM9 953 aaKnown RBP18.44■□□□□ 0.54
CAPN1-203ENST00000525013 GALNT13Q8IUC8 556 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 RAVER1Q8IY67 606 aaKnown RBP18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ZNF248Q8NDW4 579 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 SPATA22Q8NHS9 363 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 HAUS1Q96CS2 278 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 TRIB3Q96RU7 358 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 STRADBQ9C0K7 418 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ZFYVE1Q9HBF4 777 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ASCL3Q9NQ33 180 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 UBP1Q9NZI7 540 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ZNHIT2Q9UHR6 403 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ATXN7L1Q9ULK2 861 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-203ENST00000525013 SHOC2Q9UQ13 582 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 ST14Q9Y5Y6 855 aa18.44■□□□□ 0.54
CAPN1-203ENST00000525013 hCG_1818297A0A087WSY0 165 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 RGSL1A5PLK6 1076 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 RHPN2P1A8MT19 583 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 TMX2-CTNND1H3BSU7 103 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 NDUFA10O95299 355 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 ECEL1O95672 775 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 MT-CYBP00156 380 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-203ENST00000525013 ATP1A1P05023 1023 aaKnown RBP18.43■□□□□ 0.54
CAPN1-203ENST00000525013 PNLIPP16233 465 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 INHBCP55103 352 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 ADCY2Q08462 1091 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 SPRED1Q7Z699 444 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 ARL14Q8N4G2 192 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 SCARF2Q96GP6 870 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-203ENST00000525013 COX14Q96I36 57 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 RBM41Q96IZ5 413 aaKnown RBP18.43■□□□□ 0.54
CAPN1-203ENST00000525013 TEKT5Q96M29 485 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 TMEM74Q96NL1 305 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 SLC46A1Q96NT5 459 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 HEMGNQ9BXL5 484 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 GPR63Q9BZJ6 419 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 PCDHGA8Q9Y5G5 932 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 AHCTF1Q8WYP5 2266 aa18.43■□□□□ 0.54
CAPN1-203ENST00000525013 BPTFQ12830 3046 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 TNFSF15O95150 251 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 ALDH4A1P30038 563 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 OR1D5P58170 312 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 AMZ1Q400G9 498 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 PYCR3Q53H96 274 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 HENMT1Q5T8I9 393 aaKnown RBP18.42■□□□□ 0.54
CAPN1-203ENST00000525013 CCDC181Q5TID7 509 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 ALS2CLQ60I27 953 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 SPACA3Q8IXA5 215 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 FBXO39Q8N4B4 442 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 PATE1Q8WXA2 126 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 KRT35Q92764 455 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 LIN37Q96GY3 246 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-203ENST00000525013 WDR24Q96S15 920 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 SPATA16Q9BXB7 569 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms