RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	BPIFB1	Q8TDL5	484 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	SCAMP4	Q969E2	229 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	KLHL29	Q96CT2	875 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	SAAL1	Q96ER3	474 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	BICD1	Q96G01	975 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	RITA1	Q96K30	269 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	CAMK1G	Q96NX5	476 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	MACROD1	Q9BQ69	325 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	CLSTN3	Q9BQT9	956 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	NUDT22	Q9BRQ3	303 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	NAA11	Q9BSU3	229 aa	Predicted RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	TUBB6	Q9BUF5	446 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	KRTAP4-3	Q9BYR4	195 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	TTYH3	Q9C0H2	523 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	C1orf21	Q9H246	121 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	CCDC134	Q9H6E4	229 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	DDX43	Q9NXZ2	648 aa	Known RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	EHD2	Q9NZN4	543 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	HCN3	Q9P1Z3	774 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	DNAJB11	Q9UBS4	358 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	FBXL5	Q9UKA1	691 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	MKLN1	Q9UL63	735 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	KLHL20	Q9Y2M5	609 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	USP16	Q9Y5T5	823 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	ANKRD31	Q8N7Z5	1873 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	CEP290	O15078	2479 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	COL5A3	P25940	1745 aa	Predicted RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	NRXN2	Q9P2S2	1712 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	ASTN2	O75129	1339 aa	Predicted RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	SMG6	Q86US8	1419 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	SNED1	Q8TER0	1413 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	TIAM2	Q8IVF5	1701 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	GOLGA6L10	A0A0M3HER8	536 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	RGSL1	A5PLK6	1076 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	TMEM110-MUSTN1	A8MSY1	372 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	PSMD14	O00487	310 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	ADAM10	O14672	748 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	HNRNPCL1	O60812	293 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	GCNT3	O95395	438 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	RB1	P06400	928 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	PEPD	P12955	493 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	XRCC6	P12956	609 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	CHN1	P15882	459 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	GABRB1	P18505	474 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	TNFRSF8	P28908	595 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	AVPR2	P30518	371 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	HOXA11	P31270	313 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	ARL1	P40616	181 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	LMAN1	P49257	510 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	TOB1	P50616	345 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	TKTL1	P51854	596 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	RRP1	P56182	461 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	AKAP17A	Q02040	695 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	KRT17	Q04695	432 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	RPA4	Q13156	261 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	THOC5	Q13769	683 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	MORF4L2	Q15014	288 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	HLF	Q16534	295 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	PTCHD3	Q3KNS1	767 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	KBTBD12	Q3ZCT8	623 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	ZNF667	Q5HYK9	610 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	TAPT1	Q6NXT6	567 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	CDC73	Q6P1J9	531 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	ANKRD16	Q6P6B7	361 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	KDELC1	Q6UW63	502 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	PIK3AP1	Q6ZUJ8	805 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	TUSC5	Q8IXB3	177 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	FAM217A	Q8IXS0	508 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	DPP10	Q8N608	796 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	PLD5	Q8N7P1	536 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	SYT2	Q8N9I0	419 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	SPATA20	Q8TB22	786 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	DNAJB14	Q8TBM8	379 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	ABHD5	Q8WTS1	349 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	ATP6V0A1	Q93050	837 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	RNFT2	Q96EX2	444 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	PDLIM5	Q96HC4	596 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	CCDC114	Q96M63	670 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	C16orf45	Q96MC5	204 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	SLC46A1	Q96NT5	459 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	DGAT2	Q96PD7	388 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	ACTRT3	Q9BYD9	372 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	AMBRA1	Q9C0C7	1298 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	SLCO5A1	Q9H2Y9	848 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	FOXP1	Q9H334	677 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	SH2D4A	Q9H788	454 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	DNAJC18	Q9H819	358 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	TTC12	Q9H892	705 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	ALKBH4	Q9NXW9	302 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	WSB2	Q9NYS7	404 aa	Predicted RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	ANAPC2	Q9UJX6	822 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	BAG5	Q9UL15	447 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	DRG1	Q9Y295	367 aa	Known RBP	4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	PCDHB7	Q9Y5E2	793 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	CAPN7	Q9Y6W3	813 aa		4.39	□□□□□ -1.71
PCM1-223	ENST00000524356	DICER1	Q9UPY3	1922 aa	Known RBP	4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms