RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 FRMD8Q9BZ67 464 aaPredicted RBP12.46□□□□□ -0.41
CCNC-216ENST00000523961 TCEAL2Q9H3H9 227 aaPredicted RBP12.46□□□□□ -0.41
CCNC-216ENST00000523961 CAAP1Q9H8G2 361 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 ARNT2Q9HBZ2 717 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 NLGN3Q9NZ94 848 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 PAK5Q9P286 719 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 MOSPD1Q9UJG1 213 aa12.46□□□□□ -0.41
CCNC-216ENST00000523961 APOBEC2Q9Y235 224 aaKnown RBP12.46□□□□□ -0.41
CCNC-216ENST00000523961 TDRD6O60522 2096 aaKnown RBP12.46□□□□□ -0.42
CCNC-216ENST00000523961 PRSS38A1L453 326 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 C2orf81A6NN90 581 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 LMO7DNF2Z398 122 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 TRIM38O00635 465 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 SIGLEC6O43699 453 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 USP12O75317 370 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 PPFIA2O75334 1257 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 AP2A1O95782 977 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 CEACAM5P06731 702 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 ANXA6P08133 673 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 BPIP17213 487 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 FOXK2Q01167 660 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 OLIG2Q13516 323 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 C1orf61Q13536 156 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 TAF1AQ15573 450 aaPredicted RBP12.45□□□□□ -0.42
CCNC-216ENST00000523961 ALS2CLQ60I27 953 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 PDPK2PQ6A1A2 396 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 DENND5AQ6IQ26 1287 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 GSTA5Q7RTV2 222 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 LINC00523Q86TU6 105 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 TAB3Q8N5C8 712 aaPredicted RBP12.45□□□□□ -0.42
CCNC-216ENST00000523961 TRAM1L1Q8N609 369 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 PDCD7Q8N8D1 485 aaKnown RBP12.45□□□□□ -0.42
CCNC-216ENST00000523961 BRSK1Q8TDC3 778 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 ACTRT1Q8TDG2 376 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 COG1Q8WTW3 980 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 COX14Q96I36 57 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 MS4A14Q96JA4 679 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 PLEKHG4BQ96PX9 1271 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 ETNK1Q9HBU6 452 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 CYP4F12Q9HCS2 524 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 BPIFA1Q9NP55 256 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 KCND1Q9NSA2 647 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCNC-216ENST00000523961 IL17CQ9P0M4 197 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 DOLKQ9UPQ8 538 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 SLC17A4Q9Y2C5 497 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 PKP3Q9Y446 797 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 CACNA1AO00555 2505 aa12.45□□□□□ -0.42
CCNC-216ENST00000523961 ARID1BQ8NFD5 2236 aaPredicted RBP12.45□□□□□ -0.42
CCNC-216ENST00000523961 COL5A1P20908 1838 aaPredicted RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 DCHS1Q96JQ0 3298 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 GOLGA6L10A0A0M3HER8 536 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 FADS2P1A8MWK0 482 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 E7EVH7 732 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 INPP4BO15327 924 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 STX7O15400 261 aaKnown RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 CRTAMO95727 393 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 IVLP07476 585 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 ADRB1P08588 477 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 FTH1P19P0C7X4 201 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 GIMD1P0DJR0 217 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 ETS1P14921 441 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 CKMT2P17540 419 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 LPOP22079 712 aaPredicted RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 RPL22P35268 128 aaKnown RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 KCNJ1P48048 391 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 LMAN1P49257 510 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 PDE1BQ01064 536 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 PROX2Q3B8N5 592 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 KCTD16Q68DU8 428 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 ZCCHC8Q6NZY4 707 aaKnown RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 DOK6Q6PKX4 331 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 LVRNQ6Q4G3 990 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 TRIM74Q86UV6 250 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 GKN2Q86XP6 184 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 FAM181AQ8N9Y4 354 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 DTX3LQ8TDB6 740 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 SCG3Q8WXD2 468 aaKnown RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 MAGOHBQ96A72 148 aaKnown RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 NAPGQ99747 312 aaPredicted RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 AP1M1Q9BXS5 423 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 CLPBQ9H078 707 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 CARS2Q9HA77 564 aaKnown RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 MRPL40Q9NQ50 206 aaKnown RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 RAB6BQ9NRW1 208 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 EVA1BQ9NVM1 165 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 VPS18Q9P253 973 aa12.44□□□□□ -0.42
CCNC-216ENST00000523961 CNOT6Q9ULM6 557 aaKnown RBP12.44□□□□□ -0.42
CCNC-216ENST00000523961 MED19A0JLT2 244 aaPredicted RBP12.43□□□□□ -0.42
CCNC-216ENST00000523961 CTAGE9A4FU28 777 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 YY2O15391 372 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 SLC25A14O95258 325 aaPredicted RBP12.43□□□□□ -0.42
CCNC-216ENST00000523961 TRIM16O95361 564 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 ASMTLO95671 621 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 ZSCAN5DPP0CG00 497 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 SPAM1P38567 509 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 DAB2P98082 770 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 MSLNQ13421 630 aaPredicted RBP12.43□□□□□ -0.42
CCNC-216ENST00000523961 SEMA5AQ13591 1074 aa12.43□□□□□ -0.42
CCNC-216ENST00000523961 CYP1B1Q16678 543 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms