RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 QKIQ96PU8 341 aaKnown RBP eCLIP16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 ZNF446Q9NWS9 450 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 RGSL1A5PLK6 1076 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 NRP1O14786 923 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 MGRN1O60291 552 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 TSPAN8P19075 237 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 GSTM5P46439 218 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 TOP3AQ13472 1001 aaPredicted RBP16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 PDGFRLQ15198 375 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 MON1BQ7L1V2 547 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 TSTD1Q8NFU3 115 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 OR52E6Q96RD3 313 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 FNDC11Q9BVV2 318 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 HDHD2Q9H0R4 259 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 GALNT8Q9NY28 637 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 MAP2K7O14733 419 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 SLC31A1O15431 190 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 ITPKAP23677 461 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 SLC6A2P23975 617 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 ARHGAP1Q07960 439 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 PDZK1Q5T2W1 519 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 HECTD2Q5U5R9 776 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 RNF43Q68DV7 783 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 KIAA0408Q6ZU52 694 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 LRP10Q7Z4F1 713 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 PEX5LQ8IYB4 626 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 BHLHE22Q8NFJ8 381 aaPredicted RBP16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 SLC38A3Q99624 504 aa16.2■□□□□ 0.18
PCDHA3-201ENST00000522353 MCIDASD6RGH6 385 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 AP2A1O95782 977 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 HOXB6P17509 224 aaKnown RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 CDH5P33151 784 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 MRPS22P82650 360 aaKnown RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 DSC2Q02487 901 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 COX10Q12887 443 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 BNIP2Q12982 314 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 CPTPQ5TA50 214 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 IFNLR1Q8IU57 520 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 C8orf59Q8N0T1 100 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 RP9Q8TA86 221 aaKnown RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 DNAJB14Q8TBM8 379 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 PNPLA8Q9NP80 782 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 TRPS1Q9UHF7 1281 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 CORO1CQ9ULV4 474 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 GSTK1Q9Y2Q3 226 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 DYTNA2CJ06 578 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 WNT7AO00755 349 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 AOC2O75106 756 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 ASMTP46597 345 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 PSME3P61289 254 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 TNK2Q07912 1038 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 LGALS3BPQ08380 585 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 ACDQ96AP0 544 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 MIEF2Q96C03 454 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 PSMG1O95456 288 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 DDX6P26196 483 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 SPRTNQ9H040 489 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 IKZF4Q9H2S9 585 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 DPEP3Q9H4B8 488 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 MIOSQ9NXC5 875 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 COG5Q9UP83 839 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 TRBV23OR9-2A0A075B6M9 112 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 FAM237BA0A1B0GVD1 139 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 WWP2O00308 870 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 TRAFD1O14545 582 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 SLC35G6P0C7Q6 338 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 ALAS2P22557 587 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 FSHRP23945 695 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 NEDD8Q15843 81 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 DGUOKQ16854 277 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 TIGD5Q53EQ6 642 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 DENND6AQ8IWF6 608 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 MCEMP1Q8IX19 187 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 CACTIN-AS1Q8N1I8 211 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 RNASE11Q8TAA1 199 aaKnown RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 BRSK1Q8TDC3 778 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 SH3RF2Q8TEC5 729 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 SNRNP27Q8WVK2 155 aaKnown RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 ALG3Q92685 438 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 VPS35Q96QK1 796 aa16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 ZNF184Q99676 751 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 CCDC177Q9NQR7 707 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-201ENST00000522353 SLC28A2O43868 658 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 IPO13O94829 963 aaKnown RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 SHBGP04278 402 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 COX4I1P13073 169 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 HNRNPLP14866 589 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 CDH13P55290 713 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 TTMPQ5BVD1 217 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 CCNYL2Q5T2Q4 361 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 DNAJB7Q7Z6W7 309 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 CFAP206Q8IYR0 622 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 TNS4Q8IZW8 715 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 MCMBPQ9BTE3 642 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 C1orf50Q9BV19 199 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 ABI3Q9P2A4 366 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 C3orf18Q9UK00 162 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 PCDHGC4Q9Y5F7 938 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 PTGES3LE9PB15 166 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 BANF1O75531 89 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms