RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 PRR23D2P0DMB1 279 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 HOXB9P17482 250 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 CST5P28325 142 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ARRB2P32121 409 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ACTR2P61160 394 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ITGB3BPQ13352 177 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 PKP1Q13835 747 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 PTK2BQ14289 1009 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 SPARCL1Q14515 664 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ASIC2Q16515 512 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 CALCRLQ16602 461 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ZACNQ401N2 412 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 TRIM60Q495X7 471 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 CCDC38Q502W7 563 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 OTUD1Q5VV17 481 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 FAM173BQ6P4H8 233 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 AAGABQ6PD74 315 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 MDGA2Q7Z553 956 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 TLK2Q86UE8 772 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 SLC25A41Q8N5S1 370 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 DPP10Q8N608 796 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 RDM1Q8NG50 284 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 PPTC7Q8NI37 304 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ETNPPLQ8TBG4 499 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 FAM71BQ8TC56 605 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 AFG1LQ8WV93 481 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 SEPT1Q8WYJ6 367 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 KAT2AQ92830 837 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 INPP5DQ92835 1189 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 C18orf8Q96DM3 657 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ZNF419Q96HQ0 510 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ZNF479Q96JC4 524 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 SPATA33Q96N06 139 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 MTMR9Q96QG7 549 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 NPAS1Q99742 590 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 HERPUD2Q9BSE4 406 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 SORBS1Q9BX66 1292 aaKnown RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 TEKT3Q9BXF9 490 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 UNC45AQ9H3U1 944 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 MAP6D1Q9H9H5 199 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 KRCC1Q9NPI7 259 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 PNRC2Q9NPJ4 139 aaKnown RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 CHMP5Q9NZZ3 219 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 LRFN1Q9P244 771 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 SLC9A2Q9UBY0 812 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 MYO6Q9UM54 1294 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 CNTN6Q9UQ52 1028 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ATP6V1DQ9Y5K8 247 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 MORC2Q9Y6X9 1032 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ATAD5Q96QE3 1844 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 A0A0G2JMZ2 1700 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 SYNRGQ9UMZ2 1314 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 IGKV6D-21A0A0A0MT36 114 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SAC3D1A6NKF1 404 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SLC38A8A6NNN8 435 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 C4orf47A7E2U8 309 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 PRSS44E7EML9 344 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 DDX39AO00148 427 aaKnown RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 DNM1LO00429 736 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 ACOT8O14734 319 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SLC28A2O43868 658 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 NBNO60934 754 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 YEATS4O95619 227 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 CSTBP04080 98 aaKnown RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 MMP3P08254 477 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SUPT20HL2P0C7V6 817 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 ARSBP15848 533 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 HOXD3P31249 432 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SFNP31947 248 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 PRPHP41219 470 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 HALP42357 657 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SLC26A2P50443 739 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 ACLYP53396 1101 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 BEX3Q00994 111 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SP4Q02446 784 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 DSC1Q08554 894 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 TRAF2Q12933 501 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 PPP2R5CQ13362 524 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 PDIA5Q14554 519 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SLC39A14Q15043 492 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 IL17AQ16552 155 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 PFKFB4Q16877 469 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 TMEM266Q2M3C6 531 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 HSDL1Q3SXM5 330 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 INO80DQ53TQ3 878 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 ENTPD8Q5MY95 495 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 VWA5B1Q5TIE3 1220 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 KLHL17Q6TDP4 642 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 CXCL17Q6UXB2 119 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SLC16A12Q6ZSM3 486 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 RAB11FIP2Q7L804 512 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 PLPPR4Q7Z2D5 763 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 MIER3Q7Z3K6 550 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 TMEM200AQ86VY9 491 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 CCDC117Q8IWD4 279 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SMAP1Q8IYB5 467 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 ANKRD42Q8N9B4 389 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 LINC00301Q8NCQ3 95 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 GABPB2Q8TAK5 448 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 ELP5Q8TE02 316 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms