RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 DCBLD2Q96PD2 775 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 LRRN3Q9H3W5 708 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 FAM83DQ9H4H8 585 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 MAGEE1Q9HCI5 957 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 PKD2L2Q9NZM6 624 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 TAAR2Q9P1P5 351 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 LRIT1Q9P2V4 623 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 CNOT6Q9ULM6 557 aaKnown RBP16.96■□□□□ 0.31
SQLE-205ENST00000521232 TMEM98Q9Y2Y6 226 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.96■□□□□ 0.31
SQLE-205ENST00000521232 PTPRQQ9UMZ3 2332 aa16.96■□□□□ 0.3
SQLE-205ENST00000521232 CACNA1GO43497 2377 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 ZFC3H1O60293 1989 aaKnown RBP16.95■□□□□ 0.3
SQLE-205ENST00000521232 BTNL10A8MVZ5 291 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 B4DGG1 531 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 RRP8O43159 456 aaKnown RBP16.95■□□□□ 0.3
SQLE-205ENST00000521232 RPLP0P05388 317 aaKnown RBP16.95■□□□□ 0.3
SQLE-205ENST00000521232 AK4P27144 223 aaPredicted RBP16.95■□□□□ 0.3
SQLE-205ENST00000521232 MARCKSL1P49006 195 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 ERVPABLB-1P60509 514 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 WASHC5Q12768 1159 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 PEX6Q13608 980 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 GALNT3Q14435 633 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 PYCR3Q53H96 274 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 HENMT1Q5T8I9 393 aaKnown RBP16.95■□□□□ 0.3
SQLE-205ENST00000521232 DOK6Q6PKX4 331 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 LRRC69Q6ZNQ3 347 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 KDELC2Q7Z4H8 507 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 DAAM2Q86T65 1068 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 SPATA22Q8NHS9 363 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 ZDHHC1Q8WTX9 485 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 KRT35Q92764 455 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 PRR11Q96HE9 360 aaPredicted RBP16.95■□□□□ 0.3
SQLE-205ENST00000521232 RBM41Q96IZ5 413 aaKnown RBP16.95■□□□□ 0.3
SQLE-205ENST00000521232 GFM1Q96RP9 751 aaKnown RBP16.95■□□□□ 0.3
SQLE-205ENST00000521232 SUDS3Q9H7L9 328 aaPredicted RBP16.95■□□□□ 0.3
SQLE-205ENST00000521232 ZFYVE1Q9HBF4 777 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 ASCL3Q9NQ33 180 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 SATB2Q9UPW6 733 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 PCDHGA8Q9Y5G5 932 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 RNF215Q9Y6U7 377 aa16.95■□□□□ 0.3
SQLE-205ENST00000521232 TMX2-CTNND1H3BSU7 103 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 MTSS1O43312 755 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 MT-CYBP00156 380 aaPredicted RBP16.94■□□□□ 0.3
SQLE-205ENST00000521232 CD68P34810 354 aaPredicted RBP16.94■□□□□ 0.3
SQLE-205ENST00000521232 PPP2R5EQ16537 467 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 C3orf38Q5JPI3 329 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 RAD9BQ6WBX8 426 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 LYSMD3Q7Z3D4 306 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 TMC3Q7Z5M5 1100 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 PDZD3Q86UT5 571 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 TRIM74Q86UV6 250 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 CCNJLQ8IV13 435 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 WDR36Q8NI36 951 aaKnown RBP16.94■□□□□ 0.3
SQLE-205ENST00000521232 SLC46A1Q96NT5 459 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 CDH19Q9H159 772 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 SYNDIG1Q9H7V2 258 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 VPS18Q9P253 973 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 REXO2Q9Y3B8 237 aaKnown RBP16.94■□□□□ 0.3
SQLE-205ENST00000521232 PLEKHM1Q9Y4G2 1056 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 PCDHA3Q9Y5H8 950 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 DUSP10Q9Y6W6 482 aa16.94■□□□□ 0.3
SQLE-205ENST00000521232 CCDC187A0A096LP49 1063 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 FADS2P1A8MWK0 482 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 HACD1B0YJ81 288 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 D6RAR5 112 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 INPP4BO15327 924 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 DNAJC6O75061 913 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 IPO7O95373 1038 aaKnown RBP16.93■□□□□ 0.3
SQLE-205ENST00000521232 ECEL1O95672 775 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 NDST3O95803 873 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 ITPKBP27987 946 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 CTNNA1P35221 906 aaKnown RBP16.93■□□□□ 0.3
SQLE-205ENST00000521232 ABCG1P45844 678 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 COPS2P61201 443 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 B4GALNT1Q00973 533 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 PCSK7Q16549 785 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 SLC30A9Q6PML9 568 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 BBS12Q6ZW61 710 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 ZNF438Q7Z4V0 828 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 SPRED1Q7Z699 444 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 ZC3H18Q86VM9 953 aaKnown RBP16.93■□□□□ 0.3
SQLE-205ENST00000521232 CCDC50Q8IVM0 306 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 NAGSQ8N159 534 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 ARL14Q8N4G2 192 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 Q8N9G6 341 aaPredicted RBP16.93■□□□□ 0.3
SQLE-205ENST00000521232 LIN37Q96GY3 246 aaPredicted RBP16.93■□□□□ 0.3
SQLE-205ENST00000521232 OR2M4Q96R27 311 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 SRPK1Q96SB4 655 aaKnown RBP16.93■□□□□ 0.3
SQLE-205ENST00000521232 VAT1Q99536 393 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 EFR3BQ9Y2G0 817 aa16.93■□□□□ 0.3
SQLE-205ENST00000521232 SMG1Q96Q15 3661 aaKnown RBP16.92■□□□□ 0.3
SQLE-205ENST00000521232 LOC285095A0A1B0GVY8 99 aa16.92■□□□□ 0.3
SQLE-205ENST00000521232 PJA2O43164 708 aa16.92■□□□□ 0.3
SQLE-205ENST00000521232 ASMTLO95671 621 aa16.92■□□□□ 0.3
SQLE-205ENST00000521232 ATP1A1P05023 1023 aaKnown RBP16.92■□□□□ 0.3
SQLE-205ENST00000521232 PIRTP0C851 137 aa16.92■□□□□ 0.3
SQLE-205ENST00000521232 RBMS1P29558 406 aaKnown RBP16.92■□□□□ 0.3
SQLE-205ENST00000521232 CCKBRP32239 447 aa16.92■□□□□ 0.3
SQLE-205ENST00000521232 MAZP56270 477 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms