RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 NELL1Q92832 810 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MS4A14Q96JA4 679 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZNF641Q96N77 438 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NUDCD1Q96RS6 583 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 WDR24Q96S15 920 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OSBPL9Q96SU4 736 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 IL12RB2Q99665 862 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NAPGQ99747 312 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MGME1Q9BQP7 344 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OSBPL1AQ9BXW6 950 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CPEB1Q9BZB8 566 aaKnown RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 POLR1EQ9GZS1 481 aaKnown RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ATP13A3Q9H7F0 1226 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SGK2Q9HBY8 427 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NOD2Q9HC29 1040 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 WSB2Q9NYS7 404 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SERGEFQ9UGK8 458 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MBD1Q9UIS9 605 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZNF148Q9UQR1 794 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 R3HDM2Q9Y2K5 976 aaKnown RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SAR1BQ9Y6B6 198 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SDK1Q7Z5N4 2213 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KIAA1549LQ6ZVL6 1849 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 BCLAF3A2AJT9 711 aaKnown RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 A8MX80 341 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 F5H423 210 aaPredicted RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ZNF185O15231 689 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 OPA1O60313 960 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 FSBPO95073 299 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PCDH8O95206 1070 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SEMA4FO95754 770 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 IFNB1P01574 187 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PRKCGP05129 697 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SNRPB2P08579 225 aaKnown RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SERPINF2P08697 491 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ADRB3P13945 408 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 GLB1P16278 677 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 TCP1P17987 556 aaKnown RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ITIH2P19823 946 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CR2P20023 1033 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 POU3F2P20265 443 aaPredicted RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ITGB7P26010 798 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 STIP1P31948 543 aaKnown RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 DRD3P35462 400 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ACTN2P35609 894 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CD86P42081 329 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ECI1P42126 302 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PAFAH1B1P43034 410 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 KCNJ1P48048 391 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 NEK3P51956 506 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 EPHB1P54762 984 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 GFRA1P56159 465 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 AP1S1P61966 158 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 POLR2LP62875 67 aaKnown RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 FAM193AP78312 1265 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SEMG2Q02383 582 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CREB5Q02930 508 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 NIPAL4Q0D2K0 466 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 WASHC5Q12768 1159 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 MAP4K2Q12851 820 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PRKD1Q15139 912 aaPredicted RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ELF2Q15723 593 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CCNG2Q16589 344 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 UGP2Q16851 508 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 RALGPS1Q5JS13 557 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 LRRC73Q5JTD7 316 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ARMC12Q5T9G4 340 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CCDC70Q6NSX1 233 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SYT10Q6XYQ8 523 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PARS2Q7L3T8 475 aaKnown RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 GSTA5Q7RTV2 222 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 KDELC2Q7Z4H8 507 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 PRPF39Q86UA1 669 aaKnown RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 C11orf74Q86VG3 221 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 NDUFAF2Q8N183 169 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ZNF567Q8N184 647 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SVOPQ8N4V2 548 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CNTD1Q8N815 330 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 FAM71DQ8N9W8 422 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 TMEM145Q8NBT3 493 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 OR2T34Q8NGX1 318 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SLC35B2Q8TB61 432 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ARRDC2Q8TBH0 407 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 HCAR2Q8TDS4 363 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ATG4AQ8WYN0 398 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 SNX19Q92543 992 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 FATE1Q969F0 183 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 MAGOHBQ96A72 148 aaKnown RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 ZNF419Q96HQ0 510 aaPredicted RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 FEM1CQ96JP0 617 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 CAPZA3Q96KX2 299 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 MAGEB10Q96LZ2 347 aaPredicted RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 TEKT5Q96M29 485 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 NSMCE3Q96MG7 304 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 QKIQ96PU8 341 aaKnown RBP eCLIP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 TUBGCP5Q96RT8 1024 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 RBM15Q96T37 977 aaKnown RBP eCLIP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 NAP1L3Q99457 506 aaPredicted RBP5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 VAT1Q99536 393 aa5.83□□□□□ -1.48
SCARNA6.1-201ENST00000516989 TMEM121Q9BTD3 319 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms