RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 KRT18P05783 430 aaKnown RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ADRB2P07550 413 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC35E2P0CK97 266 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 IGHV4-31P0DP07 118 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ODC1P11926 461 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 TNNT1P13805 278 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PFKFB1P16118 471 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PPP1R2P41236 205 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 SYKP43405 635 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PLA2G4AP47712 749 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PEX3P56589 373 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 MCCD1P59942 119 aaPredicted RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ENPEPQ07075 957 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 MCL1Q07820 350 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PCDH1Q08174 1060 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 LGALS3BPQ08380 585 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 STRN3Q13033 797 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PRPF4BQ13523 1007 aaKnown RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 HLTFQ14527 1009 aaKnown RBP eCLIP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 MCM6Q14566 821 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ELOCQ15369 112 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ZRSR1Q15695 479 aaKnown RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 TSR1Q2NL82 804 aaKnown RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF284Q2VY69 593 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 DCAF4L1Q3SXM0 396 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 COBLL1Q53SF7 1204 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 CT47A1Q5JQC4 288 aaPredicted RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 FAM26FQ5R3K3 315 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 NT5DC1Q5TFE4 455 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 FYB2Q5VWT5 728 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 FOXR2Q6PJQ5 311 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 OGFOD3Q6PK18 319 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 USP43Q70EL4 1123 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 UNC13DQ70J99 1090 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF771Q7L3S4 317 aaPredicted RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 CCDC186Q7Z3E2 898 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 C1QL2Q7Z5L3 287 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 LUZP1Q86V48 1076 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 GPBP1Q86WP2 473 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC9A9Q8IVB4 645 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 CD302Q8IX05 232 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 DCP1BQ8IZD4 617 aaKnown RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 KRT222Q8N1A0 295 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 FSTL5Q8N475 847 aaPredicted RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 MYCT1Q8N699 235 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF507Q8TCN5 953 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 THAP3Q8WTV1 239 aaPredicted RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 KCTD13Q8WZ19 329 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 CCDC47Q96A33 483 aaKnown RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ISL2Q96A47 359 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PAGE5Q96GU1 130 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ELMO2Q96JJ3 720 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 SENP8Q96LD8 212 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 C16orf45Q96MC5 204 aaPredicted RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 NSMCE3Q96MG7 304 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 FIZ1Q96SL8 496 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ACO2Q99798 780 aaKnown RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 B9D2Q9BPU9 175 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 REEP2Q9BRK0 252 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 TCHPQ9BT92 498 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 TTLL2Q9BWV7 592 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PHACTR1Q9C0D0 580 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 KIAA1586Q9HCI6 787 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ABCB6Q9NP58 842 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 KMT5AQ9NQR1 393 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 TOPORSQ9NS56 1045 aaPredicted RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ZNF701Q9NV72 531 aaPredicted RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 RMND1Q9NWS8 449 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 TBC1D7Q9P0N9 293 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 CNTN3Q9P232 1028 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PDP2Q9P2J9 529 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 TUBGCP4Q9UGJ1 667 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 METRNQ9UJH8 293 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 SNX7Q9UNH6 387 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 EXOC7Q9UPT5 735 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 DNAH11Q96DT5 4516 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 A0A087WWV3 80 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 A0A096LNT2 108 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 A0A1B0GVL5 298 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 A0A1W2PQU0 124 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 LRRIQ4A6NIV6 560 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 CCT8L1PA6NM43 557 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 VGLL3A8MV65 326 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 K7EIL1 84 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 M0QYT0 321 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 CDC7O00311 574 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 TIMM23O14925 209 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC16A4O15374 487 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 CLDN3O15551 220 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 ATMINO43313 823 aaPredicted RBP3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 ACTN4O43707 911 aaKnown RBP3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 BNIP3LO60238 219 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 RHOBTB3O94955 611 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 SMC2O95347 1197 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 TSPAN15O95858 294 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 LDHAP00338 332 aaKnown RBP3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 EDN1P05305 212 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 THBS1P07996 1170 aa3.14□□□□□ -1.91
SCARNA13-201ENST00000516672 CLTAP09496 248 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms