RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 RNPS1Q15287 305 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 TBCEQ15813 527 aaPredicted RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 HIST2H2ACQ16777 129 aaPredicted RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 TYW3Q6IPR3 259 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 FAM122CQ6P4D5 195 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 SPSB3Q6PJ21 355 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 ATF7IPQ6VMQ6 1270 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 LINGO2Q7L985 606 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 KIAA2013Q8IYS2 634 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 TTC30BQ8N4P2 665 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 CCDC191Q8NCU4 936 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 BEST2Q8NFU1 509 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 ETNPPLQ8TBG4 499 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 RADILQ96JH8 1075 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 ITPAQ9BY32 194 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 PLEKHA4Q9H4M7 779 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 ZCCHC17Q9NP64 241 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 DDX4Q9NQI0 724 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 ADD3Q9UEY8 706 aaKnown RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 SLCO3A1Q9UIG8 710 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 KCNG2Q9UJ96 466 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 MAGED1Q9Y5V3 778 aaPredicted RBP3.26□□□□□ -1.89
HERC4-215ENST00000515753 LYVE1Q9Y5Y7 322 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 NFS1Q9Y697 457 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 PLCH2O75038 1416 aa3.26□□□□□ -1.89
HERC4-215ENST00000515753 hCG_1807616A0A1W2PRN6 198 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 NPIPB11E5RHQ5 1161 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 H7C0S8 307 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 LDLRAD4O15165 306 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 RGS11O94810 467 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 TFP02787 698 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 APOA4P06727 396 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 CSH1P0DML2 217 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 CSH2P0DML3 217 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 NR2F1P10589 423 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 ETFAP13804 333 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 GLULP15104 373 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 ACTN2P35609 894 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 BSGP35613 385 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 PSMB10P40306 273 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 PEX5P50542 639 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 HSPA2P54652 639 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 HDAC4P56524 1084 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 MC1RQ01726 317 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 CREB5Q02930 508 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 CDC16Q13042 620 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 DHX34Q14147 1143 aaKnown RBP3.25□□□□□ -1.89
HERC4-215ENST00000515753 BECN1Q14457 450 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 ARHGEF6Q15052 776 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 EFNB3Q15768 340 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 CALCRLQ16602 461 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 TCTN1Q2MV58 587 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 ZNF718Q3SXZ3 478 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 AMZ1Q400G9 498 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 HECTD3Q5T447 861 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 FAM69AQ5T7M9 428 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 WBP2NLQ6ICG8 309 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 CYP20A1Q6UW02 462 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 GPAT4Q86UL3 456 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 LURAP1LQ8IV03 231 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 SCCPDHQ8NBX0 429 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 AGBL3Q8NEM8 1001 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 LILRB1Q8NHL6 650 aaPredicted RBP3.25□□□□□ -1.89
HERC4-215ENST00000515753 USP6NLQ92738 828 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 FAM120BQ96EK7 910 aaKnown RBP3.25□□□□□ -1.89
HERC4-215ENST00000515753 BICD1Q96G01 975 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 ZC3HAV1LQ96H79 300 aaKnown RBP3.25□□□□□ -1.89
HERC4-215ENST00000515753 ADGRG7Q96K78 797 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 LBHD1Q9BQE6 289 aaPredicted RBP3.25□□□□□ -1.89
HERC4-215ENST00000515753 C1QTNF4Q9BXJ3 329 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 TTYH1Q9H313 450 aaPredicted RBP3.25□□□□□ -1.89
HERC4-215ENST00000515753 ESRP2Q9H6T0 727 aaKnown RBP3.25□□□□□ -1.89
HERC4-215ENST00000515753 EBF2Q9HAK2 575 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 VEZTQ9HBM0 779 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 ARGLU1Q9NWB6 273 aaPredicted RBP3.25□□□□□ -1.89
HERC4-215ENST00000515753 KCND2Q9NZV8 630 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 FMN1Q68DA7 1419 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 SCAPERQ9BY12 1400 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 DISP3Q9P2K9 1392 aa3.25□□□□□ -1.89
HERC4-215ENST00000515753 KDM3AQ9Y4C1 1321 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 CFAP43Q8NDM7 1665 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 ATP10AO60312 1499 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 ZCCHC11Q5TAX3 1644 aaKnown RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 PLSCR5A0PG75 271 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 DENND3A2RUS2 1198 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 MAGEA13PA6NCF6 341 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 AGAP14A8MT82 685 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 TNPO2O14787 897 aaKnown RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 TNFSF14O43557 240 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 TACC1O75410 805 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 RFPL2O75678 378 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 KRT36O76013 467 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 CGAP01215 116 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 ADRB2P07550 413 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 SNRNP70P08621 437 aaKnown RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 UBL4AP11441 157 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 EDN2P20800 178 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 MAOAP21397 527 aa3.24□□□□□ -1.89
HERC4-215ENST00000515753 CALRP27797 417 aaKnown RBP3.24□□□□□ -1.89
HERC4-215ENST00000515753 MAPK4P31152 587 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms