RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TNFRSF10CO14798 259 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 DDX3YO15523 660 aaKnown RBP11.43□□□□□ -0.58
VCAN-212ENST00000515397 CSO75390 466 aaKnown RBP11.43□□□□□ -0.58
VCAN-212ENST00000515397 AGTP01019 485 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 APOC2P02655 101 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 MPOP05164 745 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 CDK4P11802 303 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 ZNF30P17039 623 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 ADCY8P40145 1251 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 RPIAP49247 311 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 MAZP56270 477 aaKnown RBP11.43□□□□□ -0.58
VCAN-212ENST00000515397 EIF3EP60228 445 aaKnown RBP11.43□□□□□ -0.58
VCAN-212ENST00000515397 RPL26P61254 145 aaKnown RBP11.43□□□□□ -0.58
VCAN-212ENST00000515397 CCL7P80098 99 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 CTBSQ01459 385 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 PPP2R5EQ16537 467 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 CDCP2Q5VXM1 449 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 DARS2Q6PI48 645 aaKnown RBP11.43□□□□□ -0.58
VCAN-212ENST00000515397 KDELC1Q6UW63 502 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 ADAMTSL4Q6UY14 1074 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 PROSER1Q86XN7 944 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 SDR16C5Q8N3Y7 309 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 ARL10Q8N8L6 244 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 DCBLD1Q8N8Z6 715 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 GPR26Q8NDV2 337 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 IPMKQ8NFU5 416 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 CCHCR1Q8TD31 782 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 GLMNQ92990 594 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 CCDC74AQ96AQ1 378 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 HIC2Q96JB3 615 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 TBATAQ96M53 351 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 LYSMD1Q96S90 227 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 APOL2Q9BQE5 337 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 GPR63Q9BZJ6 419 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 ZFYVE1Q9HBF4 777 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 FAM153AQ9UHL3 310 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 ZNHIT2Q9UHR6 403 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 RPL26L1Q9UNX3 145 aaKnown RBP11.43□□□□□ -0.58
VCAN-212ENST00000515397 ZNF711Q9Y462 761 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 ADGRG1Q9Y653 693 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 CAPN6Q9Y6Q1 641 aa11.43□□□□□ -0.58
VCAN-212ENST00000515397 ARHGEF17Q96PE2 2063 aaPredicted RBP11.42□□□□□ -0.58
VCAN-212ENST00000515397 A0A1W2PNU3 283 aaPredicted RBP11.42□□□□□ -0.58
VCAN-212ENST00000515397 CCDC66A2RUB6 948 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 KCNN4O15554 427 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 NOBOXO60393 691 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 USP12O75317 370 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 MTX2O75431 263 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 NDST3O95803 873 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 FGF1P05230 155 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 RBP3P10745 1247 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 BPIP17213 487 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 SPARCL1Q14515 664 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 PTPRCAPQ14761 206 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 SIRPB2Q5JXA9 342 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 CCDC70Q6NSX1 233 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 FOXR1Q6PIV2 292 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 LVRNQ6Q4G3 990 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 MICALCLQ6ZW33 695 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 TMC3Q7Z5M5 1100 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 NRSN1Q8IZ57 195 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 TAB3Q8N5C8 712 aaPredicted RBP11.42□□□□□ -0.58
VCAN-212ENST00000515397 GPR156Q8NFN8 814 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 CCDC110Q8TBZ0 833 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 GPBAR1Q8TDU6 330 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 HNRNPLLQ8WVV9 542 aaKnown RBP11.42□□□□□ -0.58
VCAN-212ENST00000515397 ATXN7L3BQ96GX2 97 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 MRGPRX2Q96LB1 330 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 GORASP1Q9BQQ3 440 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 SPATA16Q9BXB7 569 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 USP29Q9HBJ7 922 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 KCTD5Q9NXV2 234 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 PKD2L2Q9NZM6 624 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 TAAR2Q9P1P5 351 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 RSPH14Q9UHP6 348 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 ATXN7L1Q9ULK2 861 aaPredicted RBP11.42□□□□□ -0.58
VCAN-212ENST00000515397 SLC17A4Q9Y2C5 497 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 R3HDM2Q9Y2K5 976 aaKnown RBP11.42□□□□□ -0.58
VCAN-212ENST00000515397 RNF215Q9Y6U7 377 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 MYLKQ15746 1914 aa11.42□□□□□ -0.58
VCAN-212ENST00000515397 CFAP47Q6ZTR5 3102 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 LOC285095A0A1B0GVY8 99 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 TMEM8BA6NDV4 472 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 HACD1B0YJ81 288 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 TLX3O43711 291 aaPredicted RBP11.41□□□□□ -0.58
VCAN-212ENST00000515397 BRINP1O60477 761 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 ECEL1O95672 775 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 EML2O95834 649 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 RPLP0P05388 317 aaKnown RBP11.41□□□□□ -0.58
VCAN-212ENST00000515397 PTMAP06454 111 aaKnown RBP11.41□□□□□ -0.58
VCAN-212ENST00000515397 GP1BAP07359 652 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 CA5AP35218 305 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 ACTR1BP42025 376 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 ACTR1AP61163 376 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 COPS2P61201 443 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 KCTD19Q17RG1 926 aaPredicted RBP11.41□□□□□ -0.58
VCAN-212ENST00000515397 PYCR3Q53H96 274 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 HENMT1Q5T8I9 393 aaKnown RBP11.41□□□□□ -0.58
VCAN-212ENST00000515397 OGFOD3Q6PK18 319 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 ZNF765Q7L2R6 523 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms