RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 QSER1Q2KHR3 1735 aa4.35□□□□□ -1.71
HTT-210ENST00000512909 FAM237BA0A1B0GVD1 139 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 MYMKA6NI61 221 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 MYO1GB0I1T2 1018 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 CCER2I3L3R5 266 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 VWA5AO00534 786 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 SEC14L5O43304 696 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 TNFSF14O43557 240 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 FRAT2O75474 233 aaPredicted RBP4.34□□□□□ -1.71
HTT-210ENST00000512909 SLC25A12O75746 678 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 RGS11O94810 467 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 IGKV5-2P06315 115 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 HEXAP06865 529 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 HOXB5P09067 269 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 TMEM11P17152 192 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 CAPN3P20807 821 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 RXRGP48443 463 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 GMPSP49915 693 aaPredicted RBP4.34□□□□□ -1.71
HTT-210ENST00000512909 DCAF7P61962 342 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 SORDQ00796 357 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 CXCL9Q07325 125 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 ERV3-1Q14264 604 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 GCKRQ14397 625 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 LPIN1Q14693 890 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 RILPL1Q5EBL4 403 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 CCDC129Q6ZRS4 1044 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 MB21D2Q8IYB1 491 aaPredicted RBP4.34□□□□□ -1.71
HTT-210ENST00000512909 ANKRD52Q8NB46 1076 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 SCCPDHQ8NBX0 429 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 C7orf57Q8NEG2 295 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 TBC1D16Q8TBP0 767 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 NEK9Q8TD19 979 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 SCFD2Q8WU76 684 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 SMG7Q92540 1137 aaKnown RBP4.34□□□□□ -1.71
HTT-210ENST00000512909 ARHGEF2Q92974 986 aaKnown RBP4.34□□□□□ -1.71
HTT-210ENST00000512909 CHCHD6Q9BRQ6 235 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 VPS33BQ9H267 617 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 MVB12BQ9H7P6 319 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 BRF2Q9HAW0 419 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 FBRSL1Q9HCM7 1045 aaKnown RBP4.34□□□□□ -1.71
HTT-210ENST00000512909 SLC6A13Q9NSD5 602 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 BLOC1S4Q9NUP1 217 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 HCFC1R1Q9NWW0 138 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 MAP3K20Q9NYL2 800 aaKnown RBP4.34□□□□□ -1.71
HTT-210ENST00000512909 HSPB7Q9UBY9 170 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 POLLQ9UGP5 575 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 SWAP70Q9UH65 585 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 FZD10Q9ULW2 581 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 PCDHA12Q9UN75 941 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 ERVK-11Q9UQG0 969 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 BTBD3Q9Y2F9 522 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 SCINQ9Y6U3 715 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 ZNF521Q96K83 1311 aa4.34□□□□□ -1.71
HTT-210ENST00000512909 COL5A3P25940 1745 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 ZNF831Q5JPB2 1677 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 NPIPB15A6NHN6 443 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 ZNF814B7Z6K7 855 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 KLRF2D3W0D1 207 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 PTGES3LE9PB15 166 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 ECE2O60344 883 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 USO1O60763 962 aaKnown RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 NDUFS3O75489 264 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 NDUFB4O95168 129 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 EIF2S1P05198 315 aaKnown RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 ETFAP13804 333 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 ARSBP15848 533 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 CDAP32320 146 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 TTKP33981 857 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 PIK3CAP42336 1068 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 ZNF81P51508 661 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 ZP1P60852 638 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 LRMPQ12912 555 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 KLF9Q13886 244 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 SIM2Q14190 667 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 DRAP1Q14919 205 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 RNPS1Q15287 305 aaKnown RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 MED22Q15528 200 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 PRICKLE4Q2TBC4 344 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 DEFB115Q30KQ5 88 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 DNTTIP2Q5QJE6 756 aaKnown RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 DAB2IPQ5VWQ8 1189 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 LRRC8EQ6NSJ5 796 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 LCTLQ6UWM7 567 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 NEK10Q6ZWH5 1172 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 PXKQ7Z7A4 578 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 TRIM74Q86UV6 250 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 TRIM73Q86UV7 250 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 SFTPA2Q8IWL1 248 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 RPAP2Q8IXW5 612 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 DSELQ8IZU8 1212 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 TMTC2Q8N394 836 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 PARP16Q8N5Y8 322 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 ZNF548Q8NEK5 533 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 MCPH1Q8NEM0 835 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 DCPSQ96C86 337 aaKnown RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 TMEM68Q96MH6 324 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 TREX2Q9BQ50 279 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 WDR77Q9BQA1 342 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 NPFFR1Q9GZQ6 430 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms