RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ARFGAP3Q9NP61 516 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 SPATS2LQ9NUQ6 558 aaKnown RBP13.22□□□□□ -0.29
RNF4-215ENST00000511843 KCTD5Q9NXV2 234 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 SLC17A4Q9Y2C5 497 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 ZNF711Q9Y462 761 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 GPSM3Q9Y4H4 160 aa13.22□□□□□ -0.29
RNF4-215ENST00000511843 OAS3Q9Y6K5 1087 aaKnown RBP13.22□□□□□ -0.29
RNF4-215ENST00000511843 ZNF106Q9H2Y7 1883 aaKnown RBP13.22□□□□□ -0.29
RNF4-215ENST00000511843 ANKRD11Q6UB99 2663 aaPredicted RBP13.22□□□□□ -0.29
RNF4-215ENST00000511843 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 CCDC66A2RUB6 948 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 PMS2P1A4D2B8 440 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 AGRPO00253 132 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 BRINP1O60477 761 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 USP12O75317 370 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 ASMTLO95671 621 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 MPOP05164 745 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 PYGMP11217 842 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 TEAD1P28347 426 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 ADCY8P40145 1251 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 MAZP56270 477 aaKnown RBP13.21□□□□□ -0.29
RNF4-215ENST00000511843 WNT3AP56704 352 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 RWDD2BP57060 319 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 CTBSQ01459 385 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 ZNF648Q5T619 568 aaPredicted RBP13.21□□□□□ -0.29
RNF4-215ENST00000511843 HENMT1Q5T8I9 393 aaKnown RBP13.21□□□□□ -0.29
RNF4-215ENST00000511843 C19orf48Q6RUI8 117 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 KDELC1Q6UW63 502 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 BZW1Q7L1Q6 419 aaKnown RBP13.21□□□□□ -0.29
RNF4-215ENST00000511843 NRSN1Q8IZ57 195 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 SDR16C5Q8N3Y7 309 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 SLC25A41Q8N5S1 370 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 Q8N9G6 341 aaPredicted RBP13.21□□□□□ -0.29
RNF4-215ENST00000511843 GPR26Q8NDV2 337 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 GPR156Q8NFN8 814 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 ACTL9Q8TC94 416 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 CCHCR1Q8TD31 782 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 GPBAR1Q8TDU6 330 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 PATE1Q8WXA2 126 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 NAT6Q93015 286 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 ATXN7L3BQ96GX2 97 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 HIC2Q96JB3 615 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 DCBLD2Q96PD2 775 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 DEPDC7Q96QD5 511 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 OSBPL8Q9BZF1 889 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 FAM83DQ9H4H8 585 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 PKD2L2Q9NZM6 624 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 RSPH14Q9UHP6 348 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 DNPEPQ9ULA0 475 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 CNOT6Q9ULM6 557 aaKnown RBP13.21□□□□□ -0.29
RNF4-215ENST00000511843 CAPN6Q9Y6Q1 641 aa13.21□□□□□ -0.29
RNF4-215ENST00000511843 URB1O60287 2271 aaKnown RBP13.2□□□□□ -0.3
RNF4-215ENST00000511843 A0A1W2PNU3 283 aaPredicted RBP13.2□□□□□ -0.3
RNF4-215ENST00000511843 APOC4-APOC2K7ER74 178 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 TLX3O43711 291 aaPredicted RBP13.2□□□□□ -0.3
RNF4-215ENST00000511843 NDST3O95803 873 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 APOC2P02655 101 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 IVLP07476 585 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 PDX1P52945 283 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 COPS2P61201 443 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 CCL7P80098 99 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 ILF3Q12906 894 aaKnown RBP eCLIP13.2□□□□□ -0.3
RNF4-215ENST00000511843 RTP5Q14D33 572 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 ISXQ2M1V0 245 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 SIRPB2Q5JXA9 342 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 PEX26Q7Z412 305 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 B3GNT8Q7Z7M8 397 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 IPMKQ8NFU5 416 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 COX14Q96I36 57 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 OR2M4Q96R27 311 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 GORASP1Q9BQQ3 440 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 GPR63Q9BZJ6 419 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 NRSN2Q9GZP1 204 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 ZFYVE1Q9HBF4 777 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 BPIFA1Q9NP55 256 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 TAAR2Q9P1P5 351 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 DKK4Q9UBT3 224 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 FAM153AQ9UHL3 310 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 AMFRQ9UKV5 643 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 ENTPD2Q9Y5L3 495 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 RNF215Q9Y6U7 377 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 PKD1L2Q7Z442 2459 aa13.2□□□□□ -0.3
RNF4-215ENST00000511843 A0A1W2PQM1 296 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 HACD1B0YJ81 288 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 DDX3YO15523 660 aaKnown RBP13.19□□□□□ -0.3
RNF4-215ENST00000511843 MTSS1O43312 755 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 BUD23O43709 281 aaKnown RBP13.19□□□□□ -0.3
RNF4-215ENST00000511843 FGF1P05230 155 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 RPLP0P05388 317 aaKnown RBP13.19□□□□□ -0.3
RNF4-215ENST00000511843 RBP3P10745 1247 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 ACTR1BP42025 376 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 EIF3EP60228 445 aaKnown RBP13.19□□□□□ -0.3
RNF4-215ENST00000511843 ACTR1AP61163 376 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 GABREP78334 506 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 OLIG2Q13516 323 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 SPIDRQ14159 915 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 HLTFQ14527 1009 aaKnown RBP eCLIP13.19□□□□□ -0.3
RNF4-215ENST00000511843 SLC14A2Q15849 920 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 C14orf28Q4W4Y0 310 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms