RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 KCNN4O15554 427 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 LIASO43766 372 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PCDHGA12O60330 932 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 OPHN1O60890 802 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 USP12O75317 370 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PMPCBO75439 489 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 GCATO75600 419 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PIAS2O75928 621 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 NEBLO76041 1014 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 CLDN7O95471 211 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 CER1O95813 267 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 ELFN1P0C7U0 828 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 ZSCAN5DPP0CG00 497 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 NME1P15531 152 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 SPINK2P20155 84 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 CSRP1P21291 193 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PMLP29590 882 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 CXCR5P32302 372 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 NUDT1P36639 197 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PTGIRP43119 386 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 NR2C2P49116 596 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 NOVA1P51513 510 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 SUOXP51687 545 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 WNT3AP56704 352 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 KIAA1024LP59773 190 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 RAD51Q06609 339 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 ITKQ08881 620 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 ELP6Q0PNE2 266 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 DNAJC3Q13217 504 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 XRCC4Q13426 336 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PDE1CQ14123 709 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 INPP5AQ14642 412 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PUM1Q14671 1186 aaKnown RBP eCLIP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 GRM3Q14832 879 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 NFATC4Q14934 902 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 TCEA2Q15560 299 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC14A2Q15849 920 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 SIRPB2Q5JXA9 342 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 HENMT1Q5T8I9 393 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 KCTD11Q693B1 232 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 MACC1Q6ZN28 852 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 KDELC2Q7Z4H8 507 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 SLCO6A1Q86UG4 719 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 HEATR4Q86WZ0 1026 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 CDKL3Q8IVW4 592 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PHACTR4Q8IZ21 702 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 TAB3Q8N5C8 712 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PRELID2Q8N945 189 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF548Q8NEK5 533 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 CCL4L1Q8NHW4 92 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 COG1Q8WTW3 980 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 C1orf54Q8WWF1 131 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 NANOS1Q8WY41 292 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 NUS1Q96E22 293 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 MS4A14Q96JA4 679 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 SPATA13Q96N96 652 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 FCRL5Q96RD9 977 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 APOL2Q9BQE5 337 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 ANP32EQ9BTT0 268 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 FICDQ9BVA6 458 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 FRMD8Q9BZ67 464 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 TSGA10Q9BZW7 698 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 ZDHHC5Q9C0B5 715 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 CARD9Q9H257 536 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 ERVMER34-1Q9H9K5 563 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 GDF3Q9NR23 364 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 KLHL8Q9P2G9 620 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PCDHGB2Q9Y5G2 931 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 HS3ST3A1Q9Y663 406 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PTPRBP23467 1997 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 PCNX2A6NKB5 2137 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ASXL3Q9C0F0 2248 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC35F4A4IF30 521 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 FIGNL2A6NMB9 653 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 H7C0C1 242 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 NEMP1O14524 444 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF185O15231 689 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 BUD23O43709 281 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 FOXD2O60548 495 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC4A1P02730 911 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 SYPP08247 313 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ADRB1P08588 477 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 BPIP17213 487 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 DGKAP23743 735 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 TRIM23P36406 574 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 GRIA1P42261 906 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 RABIFP47224 123 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ATP5OP48047 213 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ACADVLP49748 655 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 C21orf59P57076 290 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 CDK3Q00526 305 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 CDK18Q07002 472 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 SFSWAPQ12872 951 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 MTM1Q13496 603 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 C1orf61Q13536 156 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 SPARCL1Q14515 664 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 LRRC14Q15048 493 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ANKRD20A2Q5SQ80 823 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF648Q5T619 568 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms