RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 TMEM11P17152 192 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 HLA-DPA1P20036 260 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 PTPN3P26045 913 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 CCKBRP32239 447 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 SHMT1P34896 483 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 RYKP34925 604 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 ZNF131P52739 623 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 SLC12A3P55017 1021 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 DRAP1Q14919 205 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 HSPB2Q16082 182 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 HIST2H2ACQ16777 129 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 C2orf76Q3KRA6 126 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 TTC31Q49AM3 519 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 KLHL22Q53GT1 634 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 GLRA4Q5JXX5 417 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 GALNT17Q6IS24 598 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 WDR73Q6P4I2 378 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 LCTLQ6UWM7 567 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 PPP1R21Q6ZMI0 780 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 TAOK1Q7L7X3 1001 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 SLC9B2Q86UD5 537 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 IQCHQ86VS3 1027 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 SCYL3Q8IZE3 742 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 SIX6OS1Q8N1H7 587 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 PAQR4Q8N4S7 273 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 OR52N4Q8NGI2 321 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 C16orf52Q8NHV5 167 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 UTP15Q8TED0 518 aaKnown RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 ZFPM2Q8WW38 1151 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 SGCDQ92629 289 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 CELF1Q92879 486 aaKnown RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 PDLIM5Q96HC4 596 aaKnown RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 TSGA13Q96PP4 275 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 FRG2BQ96QU4 278 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 CDRT15Q96T59 188 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 DENND2DQ9H6A0 471 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 MID1IP1Q9NPA3 183 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 SIRT3Q9NTG7 399 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 PSD3Q9NYI0 1048 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 HAO2Q9NYQ3 351 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 AKAP7Q9P0M2 348 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 ZNF580Q9UK33 172 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 FAM96BQ9Y3D0 163 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 MTF2Q9Y483 593 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 LRP12Q9Y561 859 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 PCDHGA5Q9Y5G8 931 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 PCDHGA1Q9Y5H4 931 aa4.78□□□□□ -1.64
USO1-202ENST00000508454 SIRT4Q9Y6E7 314 aaPredicted RBP4.78□□□□□ -1.64
USO1-202ENST00000508454 CXorf65A6NEN9 183 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 TTC34A8MYJ7 566 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 H3BQ06 376 aaPredicted RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 CCDC188H7C350 402 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 CLIC1O00299 241 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 SOCS2O14508 198 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 INSIG1O15503 277 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 PRPF4O43172 522 aaKnown RBP eCLIP4.77□□□□□ -1.65
USO1-202ENST00000508454 STX6O43752 255 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 SLC25A17O43808 307 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 ZBTB14O43829 449 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 CELF2O95319 508 aaKnown RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 MT-CYBP00156 380 aaPredicted RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 IL1AP01583 271 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 KLKB1P03952 638 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 PTMAP06454 111 aaKnown RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 ZFYP08048 801 aaPredicted RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 PCP11498 1178 aaKnown RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 PRF1P14222 555 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 ERCC2P18074 760 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 ANXA7P20073 488 aaKnown RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 SKIV2L2P42285 1042 aaKnown RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 RAB28P51157 221 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 SCN1BQ07699 218 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 GRSF1Q12849 480 aaKnown RBP eCLIP4.77□□□□□ -1.65
USO1-202ENST00000508454 CAPSQ13938 189 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 KCNC3Q14003 757 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 SMU1Q2TAY7 513 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 CERKLQ49MI3 558 aaPredicted RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 C10orf25Q5T742 122 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 C6orf163Q5TEZ5 329 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 PXDC1Q5TGL8 231 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 DAB2IPQ5VWQ8 1189 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 RUSC1-AS1Q66K80 236 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 DENND2CQ68D51 928 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 KRTAP5-11Q6L8G4 156 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 SHC4Q6S5L8 630 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 RANBP10Q6VN20 620 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 SPATA19Q7Z5L4 167 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 TSPAN33Q86UF1 283 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 KLBQ86Z14 1044 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 SFRP1Q8N474 314 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 IQUBQ8NA54 791 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 RBM15BQ8NDT2 890 aaKnown RBP4.77□□□□□ -1.65
USO1-202ENST00000508454 OR4N2Q8NGD1 307 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 OR14L1PQ8NHC6 308 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 PRSS3P2Q8NHM4 247 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 CFAP61Q8NHU2 1237 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 NSMCE1Q8WV22 266 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 HDAC11Q96DB2 347 aa4.77□□□□□ -1.65
USO1-202ENST00000508454 TEFMQ96QE5 360 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms