RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TAS2R42Q7RTR8 314 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 SDCCAG8Q86SQ7 713 aaPredicted RBP12.15□□□□□ -0.46
LIN54-206ENST00000506560 ITFG1Q8TB96 612 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 TSPAN17Q96FV3 270 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 DENND2DQ9H6A0 471 aaPredicted RBP12.15□□□□□ -0.46
LIN54-206ENST00000506560 SARS2Q9NP81 518 aaKnown RBP12.15□□□□□ -0.46
LIN54-206ENST00000506560 TDP1Q9NUW8 608 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 GTSE1Q9NYZ3 720 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 RIMKLBQ9ULI2 386 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 C1orf232A0A0U1RR37 186 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 CCDC189A1A4V9 331 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 CDC7O00311 574 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 GYG2O15488 501 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 CCDC22O60826 627 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 PTPN2P17706 415 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 HNF1BP35680 557 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 EPHA5P54756 1037 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 SULT2A1Q06520 285 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
LIN54-206ENST00000506560 ACAP2Q15057 778 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 E2F5Q15329 346 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 PSRC1Q6PGN9 363 aaPredicted RBP12.15□□□□□ -0.46
LIN54-206ENST00000506560 TEX9Q8N6V9 391 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 CHST14Q8NCH0 376 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 ESAMQ96AP7 390 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 MID2Q9UJV3 735 aa12.15□□□□□ -0.46
LIN54-206ENST00000506560 NPIPB15A6NHN6 443 aaPredicted RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 NCF1BA6NI72 391 aaPredicted RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 NCF1CA8MVU1 366 aaPredicted RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 SORBS2O94875 1100 aaKnown RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 NCF1P14598 390 aaPredicted RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 TYRP14679 529 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 ITGB6P18564 788 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 SUOXP51687 545 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 PRKAA2P54646 552 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 SLC25A3Q00325 362 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 BCL2L1Q07817 233 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 TCEAL5Q5H9L2 206 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 FAM91A1Q658Y4 838 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 CLEC6AQ6EIG7 209 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 Q6ZVU0 165 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 LMNTD2Q8IXW0 634 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 EFCAB3Q8N7B9 438 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 ZNF366Q8N895 744 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 SNX31Q8N9S9 440 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 CYB5D2Q8WUJ1 264 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 WDR60Q8WVS4 1066 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 ACDQ96AP0 544 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 ZNF707Q96C28 371 aaPredicted RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 RSPRY1Q96DX4 576 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 GSTO2Q9H4Y5 243 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 TCF7L2Q9NQB0 619 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 NKX1-2Q9UD57 310 aaPredicted RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 SCN8AQ9UQD0 1980 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 A0A0J9YYE9 177 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 HDAC3O15379 428 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 HTRA2O43464 458 aaPredicted RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 TRBC1P01850 177 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 CES1P23141 567 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 AP1S1P61966 158 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 TSNQ15631 228 aaKnown RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 CDKN3Q16667 212 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 PRSS36Q5K4E3 855 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 MPP7Q5T2T1 576 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 ARMC3Q5W041 872 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 SEL1L3Q68CR1 1132 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 KLC3Q6P597 504 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 DPY19L3Q6ZPD9 716 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 LCA5Q86VQ0 697 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 CLDN19Q8N6F1 224 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 OR2AP1Q8NGE2 309 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 LKAAEAR1Q8TD35 194 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 SCG3Q8WXD2 468 aaKnown RBP12.14□□□□□ -0.47
LIN54-206ENST00000506560 MCOLN1Q9GZU1 580 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 TAGLN3Q9UI15 199 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 PTGDR2Q9Y5Y4 395 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 PRSS21Q9Y6M0 314 aa12.14□□□□□ -0.47
LIN54-206ENST00000506560 NPEPPSL1A6NEC2 478 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ANTXRLA6NF34 631 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 SUPT7LO94864 414 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PSMA3P25788 255 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 HMGCLP35914 325 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 SERPINB5P36952 375 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PRKAA1Q13131 559 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PPP1R3AQ16821 1122 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PFKFB4Q16877 469 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 UNC50Q53HI1 259 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 RALGPS1Q5JS13 557 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 C22orf39Q6P5X5 142 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PTGR2Q8N8N7 351 aaPredicted RBP12.13□□□□□ -0.47
LIN54-206ENST00000506560 GABPB2Q8TAK5 448 aaPredicted RBP12.13□□□□□ -0.47
LIN54-206ENST00000506560 GRIN3AQ8TCU5 1115 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
LIN54-206ENST00000506560 CATSPER2Q96P56 530 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ATOH8Q96SQ7 321 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 MYCBPQ99417 103 aaPredicted RBP12.13□□□□□ -0.47
LIN54-206ENST00000506560 APOL5Q9BWW9 433 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ZDHHC6Q9H6R6 413 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 LZTS1Q9Y250 596 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ASB1Q9Y576 335 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms