RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 UBL4AP11441 157 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 SRCP12931 536 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 DDX5P17844 614 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 MAOAP21397 527 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 ELF1P32519 619 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 HARS2P49590 506 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 METAP2P50579 478 aaKnown RBP eCLIP2.89□□□□□ -1.95
RIF1-212ENST00000498041 CASP6P55212 293 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 RPL36AP83881 106 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 SORDQ00796 357 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 COASYQ13057 564 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 TBX2Q13207 712 aaPredicted RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 G3BP1Q13283 466 aaKnown RBP eCLIP2.89□□□□□ -1.95
RIF1-212ENST00000498041 SNTA1Q13424 505 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 NAE1Q13564 534 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 SCN5AQ14524 2016 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 RRS1Q15050 365 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 OASLQ15646 514 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 C2orf68Q2NKX9 166 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 ATP13A5Q4VNC0 1218 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 SETMARQ53H47 684 aaPredicted RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 JAKMIP3Q5VZ66 844 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 PLEKHA7Q6IQ23 1121 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 CDC73Q6P1J9 531 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 METTL2BQ6P1Q9 378 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 FAM122CQ6P4D5 195 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.89□□□□□ -1.95
RIF1-212ENST00000498041 SPATA31D1Q6ZQQ2 1576 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 TAOK1Q7L7X3 1001 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 R3HCC1LQ7Z5L2 792 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 WDR63Q8IWG1 891 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 DSELQ8IZU8 1212 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 RFFLQ8WZ73 363 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 BICD1Q96G01 975 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 IGSF21Q96ID5 467 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 METTL2AQ96IZ6 378 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 SLC41A2Q96JW4 573 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 ZNF385AQ96PM9 386 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 SH3GL2Q99962 352 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 FAM110AQ9BQ89 295 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 HAUS8Q9BT25 410 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 SLC26A6Q9BXS9 759 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 TKTL2Q9H0I9 626 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 RANBP17Q9H2T7 1088 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 NDST4Q9H3R1 872 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 GPR108Q9NPR9 543 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 CNGB3Q9NQW8 809 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 ASAH2Q9NR71 780 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 PCDHB16Q9NRJ7 776 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 HAO1Q9UJM8 370 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 ERVK-11Q9UQG0 969 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 AAR2Q9Y312 384 aaKnown RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 STRCQ7RTU9 1775 aa2.89□□□□□ -1.95
RIF1-212ENST00000498041 CENPJQ9HC77 1338 aaPredicted RBP2.89□□□□□ -1.95
RIF1-212ENST00000498041 SHPRHQ149N8 1683 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 AGLP35573 1532 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 PEAK1Q9H792 1746 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 MARF1Q9Y4F3 1742 aaKnown RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 NSD3Q9BZ95 1437 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 YTHDC2Q9H6S0 1430 aaKnown RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 A0A1B0GUV1 79 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 EIF3CLB5ME19 914 aaKnown RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 PRR23D1E9PI22 279 aaPredicted RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 SOCS6O14544 535 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 PLRG1O43660 514 aaKnown RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 TIPRLO75663 272 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 SEC14L2O76054 403 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 CLDN14O95500 239 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 PMS2P2O95744 297 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 CYC1P08574 325 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 SNRNP70P08621 437 aaKnown RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 HMOX1P09601 288 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 PRR23D2P0DMB1 279 aaPredicted RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 G6PDP11413 515 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 ATP1A3P13637 1013 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 KRT9P35527 623 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 EIF2S3P41091 472 aaKnown RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 POU3F1Q03052 451 aaPredicted RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 EEF1A2Q05639 463 aaKnown RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 ZNF155Q12901 538 aaPredicted RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 TNFAIP1Q13829 316 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 FGFBP1Q14512 234 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 DRAP1Q14919 205 aaPredicted RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 CCNG2Q16589 344 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 KRT24Q2M2I5 525 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 SLC45A4Q5BKX6 768 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 C6orf141Q5SZD1 244 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 GGNBP1Q5YKI7 109 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 CCDC70Q6NSX1 233 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 ATF7IPQ6VMQ6 1270 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 KRBA2Q6ZNG9 492 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 GSTA5Q7RTV2 222 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 SPATA6LQ8N4H0 392 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 RBMXL3Q8N7X1 1067 aaKnown RBP2.88□□□□□ -1.95
RIF1-212ENST00000498041 PCYOX1LQ8NBM8 494 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 SMRP1Q8NCR6 262 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 METTL6Q8TCB7 284 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 MAGEC3Q8TD91 643 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 WFIKKN2Q8TEU8 576 aa2.88□□□□□ -1.95
RIF1-212ENST00000498041 GTF3C6Q969F1 213 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms