RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 CSH1P0DML2 217 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 CSH2P0DML3 217 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 BCKDHBP21953 392 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 ACAT1P24752 427 aaKnown RBP6.74□□□□□ -1.33
VIM-207ENST00000495528 CYP2F1P24903 491 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 DGKEP52429 567 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 ZNF131P52739 623 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 SEC24CP53992 1094 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 BLOC1S1P78537 153 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 GTF2BQ00403 316 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 MPP3Q13368 585 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 ZNF268Q14587 947 aaPredicted RBP6.74□□□□□ -1.33
VIM-207ENST00000495528 MTF1Q14872 753 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 POSTNQ15063 836 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 ELF2Q15723 593 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 ZNF77Q15935 545 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 ZIK1Q3SY52 487 aaPredicted RBP6.74□□□□□ -1.33
VIM-207ENST00000495528 CCDC183Q5T5S1 534 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 DAB2IPQ5VWQ8 1189 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 RGS7BPQ6MZT1 257 aaPredicted RBP6.74□□□□□ -1.33
VIM-207ENST00000495528 CRELD2Q6UXH1 353 aaPredicted RBP6.74□□□□□ -1.33
VIM-207ENST00000495528 EFCAB13Q8IY85 973 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 ARL14EPQ8N8R7 260 aaPredicted RBP6.74□□□□□ -1.33
VIM-207ENST00000495528 LINC00476Q8WZB0 136 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 SMARCE1Q969G3 411 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 CCDC34Q96HJ3 373 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 OSBPL9Q96SU4 736 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 MESP1Q9BRJ9 268 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 PARVGQ9HBI0 331 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 TRPC7Q9HCX4 862 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 DUS2Q9NX74 493 aaKnown RBP6.74□□□□□ -1.33
VIM-207ENST00000495528 GTF3C4Q9UKN8 822 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 ITGB1BP2Q9UKP3 347 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.74□□□□□ -1.33
VIM-207ENST00000495528 WNT6Q9Y6F9 365 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 STYXL1Q9Y6J8 313 aa6.74□□□□□ -1.33
VIM-207ENST00000495528 PDCD11Q14690 1871 aaKnown RBP6.73□□□□□ -1.33
VIM-207ENST00000495528 K7EQS6 105 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 HCRTO43612 131 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 LETM1O95202 739 aaPredicted RBP6.73□□□□□ -1.33
VIM-207ENST00000495528 SMC2O95347 1197 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 IDEP14735 1019 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 SCP2P22307 547 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 ADSSP30520 456 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 IFNAR2P48551 515 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 NEK3P51956 506 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 WNT3P56703 355 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 RPL10AP62906 217 aaKnown RBP6.73□□□□□ -1.33
VIM-207ENST00000495528 ASIC1P78348 528 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 IRX4P78413 519 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 ZXDBP98169 803 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 TSPY1Q01534 308 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 CCDC142Q17RM4 750 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 ZSCAN23Q3MJ62 389 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 MAP9Q49MG5 647 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 PMS2CLQ68D20 193 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 SASS6Q6UVJ0 657 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 MRGPRGQ86SM5 289 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 LIX1LQ8IVB5 337 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 KRT78Q8N1N4 520 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 PDCL2Q8N4E4 241 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 TSTD1Q8NFU3 115 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 SPSB4Q96A44 273 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 EXOC4Q96A65 974 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 DNAJC19Q96DA6 116 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 COQ10AQ96MF6 247 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 PKMYT1Q99640 499 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 ACBD6Q9BR61 282 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 PTDSS2Q9BVG9 487 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 NAA15Q9BXJ9 866 aaKnown RBP6.73□□□□□ -1.33
VIM-207ENST00000495528 BTBD1Q9H0C5 482 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 PANK4Q9NVE7 773 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 DDX43Q9NXZ2 648 aaKnown RBP6.73□□□□□ -1.33
VIM-207ENST00000495528 TBC1D7Q9P0N9 293 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 GCNT4Q9P109 453 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 AGO2Q9UKV8 859 aaKnown RBP6.73□□□□□ -1.33
VIM-207ENST00000495528 NDRG4Q9ULP0 352 aaKnown RBP6.73□□□□□ -1.33
VIM-207ENST00000495528 GREB1Q4ZG55 1949 aa6.73□□□□□ -1.33
VIM-207ENST00000495528 CHD6Q8TD26 2715 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 TRAV19A0A0A6YYK7 116 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 SYCE3A1L190 88 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 KLRC4O43908 158 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 TBCAO75347 108 aaKnown RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 ESRRBO95718 433 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 RPN1P04843 607 aaKnown RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 CEACAM1P13688 526 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 CSRP1P21291 193 aaKnown RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 ADRA1BP35368 520 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 OPRD1P41143 372 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 FOLR3P41439 243 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 DHPSP49366 369 aaPredicted RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 ITGA8P53708 1063 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 PRKAG1P54619 331 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 MRPS35P82673 323 aaKnown RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 POU5F1Q01860 360 aaKnown RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 MYO1EQ12965 1108 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 E2F2Q14209 437 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 ICE2Q659A1 982 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 ANO7Q6IWH7 933 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 ZNF720Q7Z2F6 126 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms