RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TMEM265A0A087WTH1 108 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 TRIM64CA6NLI5 447 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 DRGXA6NNA5 263 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 E7ENX8 843 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 H3BNH8 94 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 SOX1O00570 391 aaPredicted RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 CD3EAPO15446 510 aaKnown RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 RNASEH2AO75792 299 aaKnown RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 NDST3O95803 873 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 PEX11BO96011 259 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 AMHP03971 560 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 UROSP10746 265 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 CD1DP15813 335 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 CD86P42081 329 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 ABCG1P45844 678 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 TTPAP49638 278 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 CLCN4P51793 760 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 STC1P52823 247 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 ADARP55265 1226 aaKnown RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 ITKQ08881 620 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 MAD2L1Q13257 205 aaPredicted RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 DCTN2Q13561 401 aaKnown RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 PEX6Q13608 980 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 DSC3Q14574 896 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 POLD3Q15054 466 aaPredicted RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 CRY1Q16526 586 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 PDCD4Q53EL6 469 aaKnown RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 GDF6Q6KF10 455 aaPredicted RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 KLHDC10Q6PID8 442 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 GLB1LQ6UWU2 654 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 RNF165Q6ZSG1 346 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 ISCA2Q86U28 154 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 LILRA2Q8N149 483 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 DRAXINQ8NBI3 349 aaPredicted RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 C3orf58Q8NDZ4 430 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 ACVR1CQ8NER5 493 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 OR4L1Q8NH43 312 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 ZFP28Q8NHY6 868 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 TWIST2Q8WVJ9 160 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 HERVK_113Q902F9 699 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 CASP10Q92851 521 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 MPP4Q96JB8 637 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 TUBA1CQ9BQE3 449 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 ZCWPW1Q9H0M4 648 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 MAGEH1Q9H213 219 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 AGO3Q9H9G7 860 aaKnown RBP11.45□□□□□ -0.58
RFC4-214ENST00000494047 SEPT3Q9UH03 358 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 MAGEL2Q9UJ55 1249 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 PCDHB5Q9Y5E4 795 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 SNX13Q9Y5W8 968 aa11.45□□□□□ -0.58
RFC4-214ENST00000494047 A0A1W2PP18 115 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 EME2A4GXA9 379 aaPredicted RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 PRORSD1PA6NEY8 169 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 C2orf81A6NN90 581 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 H0YAE9 185 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 AKAP10O43572 662 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 PRAMEF11O60813 436 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 VPS26AO75436 327 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 KATNA1O75449 491 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 GMNNO75496 209 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 EEDO75530 441 aaKnown RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 TRMUO75648 421 aaKnown RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 DNAJB5O75953 348 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 GFAPP14136 432 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 HNRNPLP14866 589 aaKnown RBP eCLIP11.44□□□□□ -0.58
RFC4-214ENST00000494047 SELPP16109 830 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 MSH3P20585 1137 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 GPX3P22352 226 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 MYF6P23409 242 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 DPP6P42658 865 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 ALDH3B2P48448 385 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 SLC7A2P52569 658 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 CCL23P55773 120 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 MYBPC1Q00872 1141 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 ELAVL2Q12926 359 aaKnown RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 RCAN2Q14206 197 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 C5orf22Q49AR2 442 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 FAM26DQ5JW98 314 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 TBCELQ5QJ74 424 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 C6orf10Q5SRN2 563 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 RBM20Q5T481 1227 aaKnown RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 TTC23LQ6PF05 361 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 C16orf59Q7L2K0 433 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 MFSD6LQ8IWD5 586 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 LRRC43Q8N309 656 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 FBXO39Q8N4B4 442 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 CARNMT1Q8N4J0 409 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 PDZD8Q8NEN9 1154 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 OR56A4Q8NGH8 313 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 FAM81AQ8TBF8 368 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 OVCA2Q8WZ82 227 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 PABPC5Q96DU9 382 aaKnown RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 LRCH3Q96II8 777 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 SPATA17Q96L03 361 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 OLFM1Q99784 485 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 TMEM79Q9BSE2 394 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 AARSD1Q9BTE6 412 aaKnown RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 BRINP2Q9C0B6 783 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms