RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 NRROSQ86YC3 692 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 CCNJLQ8IV13 435 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 TMEM74Q96NL1 305 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 OR2M4Q96R27 311 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 CEP41Q9BYV8 373 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 STRADBQ9C0K7 418 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 RMI1Q9H9A7 625 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 SPATS2LQ9NUQ6 558 aaKnown RBP23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 RABGEF1Q9UJ41 708 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 SATB2Q9UPW6 733 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 EFR3BQ9Y2G0 817 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 NBEAQ8NFP9 2946 aa23.53■■□□□ 1.36
CTDSP1-211ENST00000492545 hCG_1818297A0A087WSY0 165 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 CCDC187A0A096LP49 1063 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 HACD1B0YJ81 288 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 RPLP0P05388 317 aaKnown RBP23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 PCBP4P57723 403 aaKnown RBP23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 CTBSQ01459 385 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 CLPPQ16740 277 aaPredicted RBP23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 HENMT1Q5T8I9 393 aaKnown RBP23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 CCDC50Q8IVM0 306 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 ARL14Q8N4G2 192 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 ZNF248Q8NDW4 579 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 ZDHHC1Q8WTX9 485 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 LIN37Q96GY3 246 aaPredicted RBP23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 SLC46A1Q96NT5 459 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 AGAP2Q99490 1192 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 GOLPH3Q9H4A6 298 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 SYNDIG1Q9H7V2 258 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 SAE1Q9UBE0 346 aaPredicted RBP23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 TMEM98Q9Y2Y6 226 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 RNF215Q9Y6U7 377 aa23.52■■□□□ 1.36
CTDSP1-211ENST00000492545 A0A1W2PQM1 296 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 SOWAHDA6NJG2 315 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 D6RAR5 112 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 NDST3O95803 873 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 EPOP01588 193 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 XRCC4Q13426 336 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 GALNT3Q14435 633 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 PYCR3Q53H96 274 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 C3orf38Q5JPI3 329 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 DOK6Q6PKX4 331 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 ZNF438Q7Z4V0 828 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 TMC3Q7Z5M5 1100 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 PDZD3Q86UT5 571 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 GALNT13Q8IUC8 556 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 SUDS3Q9H7L9 328 aaPredicted RBP23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 NFKBIL1Q9UBC1 381 aaPredicted RBP23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 PCDHA3Q9Y5H8 950 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 ADAMTS20P59510 1910 aa23.51■■□□□ 1.35
CTDSP1-211ENST00000492545 PECAM1P16284 738 aaPredicted RBP23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 CCKBRP32239 447 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 CTNNA1P35221 906 aaKnown RBP23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 TNNT3P45378 269 aaPredicted RBP23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 GPR3P46089 330 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 PDX1P52945 283 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 INHBCP55103 352 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 DCDC1P59894 354 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 WASHC5Q12768 1159 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 PDPK2PQ6A1A2 396 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 SLC30A9Q6PML9 568 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 BBS12Q6ZW61 710 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 LYSMD3Q7Z3D4 306 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 SPRED1Q7Z699 444 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 PTCD2Q8WV60 388 aaKnown RBP23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 TMEM159Q96B96 161 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 WDR24Q96S15 920 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 FERMT1Q9BQL6 677 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 ZSCAN5AQ9BUG6 496 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 ASCL3Q9NQ33 180 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 FAM153AQ9UHL3 310 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 TRHDEQ9UKU6 1024 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 CNOT6Q9ULM6 557 aaKnown RBP23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 TFR2Q9UP52 801 aa23.5■■□□□ 1.35
CTDSP1-211ENST00000492545 CACNA1GO43497 2377 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 ARHGEF17Q96PE2 2063 aaPredicted RBP23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 RHPN2P1A8MT19 583 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 GPR89AB7ZAQ6 455 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 INPP4BO15327 924 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 ASMTLO95671 621 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 GPR89BP0CG08 455 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 AK4P27144 223 aaPredicted RBP23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 NAP1L1P55209 391 aaKnown RBP23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 ADCY2Q08462 1091 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 BIRC2Q13490 618 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 NR1D2Q14995 579 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 PCSK7Q16549 785 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 KDELC2Q7Z4H8 507 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 TXLNBQ8N3L3 684 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 Q8N9G6 341 aaPredicted RBP23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 SPATA22Q8NHS9 363 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 KRT35Q92764 455 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 CCDC97Q96F63 343 aaPredicted RBP23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 GPR63Q9BZJ6 419 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 TRABDQ9H4I3 376 aa23.49■■□□□ 1.35
CTDSP1-211ENST00000492545 CCDC66A2RUB6 948 aa23.48■■□□□ 1.35
CTDSP1-211ENST00000492545 APOC4-APOC2K7ER74 178 aa23.48■■□□□ 1.35
CTDSP1-211ENST00000492545 PMPCBO75439 489 aa23.48■■□□□ 1.35
CTDSP1-211ENST00000492545 ECEL1O95672 775 aa23.48■■□□□ 1.35
CTDSP1-211ENST00000492545 MT-CYBP00156 380 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms