RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LRRC4CQ9HCJ2 640 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 ETNK2Q9NVF9 386 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 PLEKHB1Q9UF11 243 aaPredicted RBP13.14□□□□□ -0.31
USF1-206ENST00000491629 PPIL1Q9Y3C6 166 aa13.14□□□□□ -0.31
USF1-206ENST00000491629 OAS3Q9Y6K5 1087 aaKnown RBP13.14□□□□□ -0.31
USF1-206ENST00000491629 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.13□□□□□ -0.31
USF1-206ENST00000491629 A6NCN8 305 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 GOLGA6CA6NDK9 693 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 GOLGA6BA6NDN3 693 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 PSMD11O00231 422 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 DNAJC6O75061 913 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 SOCS5O75159 536 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 PDHA1P08559 390 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 GOLGA6DP0CG33 693 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 CTPS1P17812 591 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 PTSQ03393 145 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 DPYSQ14117 519 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 ERMARDQ5T6L9 678 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 TMCO4Q5TGY1 634 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 TCTN3Q6NUS6 607 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 MCOLN2Q8IZK6 566 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 PAF1Q8N7H5 531 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 OR10G6Q8NH81 332 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 PIH1D2Q8WWB5 315 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 NCSTNQ92542 709 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 SCRN2Q96FV2 425 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 NUDCD1Q96RS6 583 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 SLC38A3Q99624 504 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 GOLGA6AQ9NYA3 693 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 TAS2R14Q9NYV8 317 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 CWC15Q9P013 229 aaKnown RBP13.13□□□□□ -0.31
USF1-206ENST00000491629 TBC1D29Q9UFV1 150 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 KLHL3Q9UH77 587 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 PCSK1NQ9UHG2 260 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 PHTF1Q9UMS5 762 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 PRKAB1Q9Y478 270 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 RPS6KL1Q9Y6S9 549 aa13.13□□□□□ -0.31
USF1-206ENST00000491629 PGLSO95336 258 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 EEF1GP26641 437 aaKnown RBP13.12□□□□□ -0.31
USF1-206ENST00000491629 GPR1P46091 355 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 RENBPP51606 427 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 MAXP61244 160 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 HHEXQ03014 270 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 NFATC2Q13469 925 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 KRT31Q15323 416 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 CAPRIN2Q6IMN6 1127 aaKnown RBP13.12□□□□□ -0.31
USF1-206ENST00000491629 IYDQ6PHW0 289 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 KDELC2Q7Z4H8 507 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 AHCYL2Q96HN2 611 aaKnown RBP13.12□□□□□ -0.31
USF1-206ENST00000491629 WDR24Q96S15 920 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 AGPAT1Q99943 283 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 MGME1Q9BQP7 344 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 ZPBPQ9BS86 351 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 EFHD1Q9BUP0 239 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 TBC1D10AQ9BXI6 508 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 SARS2Q9NP81 518 aaKnown RBP13.12□□□□□ -0.31
USF1-206ENST00000491629 KCTD5Q9NXV2 234 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 TLK1Q9UKI8 766 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 CNOT6Q9ULM6 557 aaKnown RBP13.12□□□□□ -0.31
USF1-206ENST00000491629 KCTD3Q9Y597 815 aa13.12□□□□□ -0.31
USF1-206ENST00000491629 ANKRD17O75179 2603 aaKnown RBP13.11□□□□□ -0.31
USF1-206ENST00000491629 POLR1CO15160 346 aaPredicted RBP13.11□□□□□ -0.31
USF1-206ENST00000491629 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
USF1-206ENST00000491629 FZD6O60353 706 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 MAFKO60675 156 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 SEMA7AO75326 666 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 ATP1A1P05023 1023 aaKnown RBP13.11□□□□□ -0.31
USF1-206ENST00000491629 CYP2A6P11509 494 aaPredicted RBP13.11□□□□□ -0.31
USF1-206ENST00000491629 GNLYP22749 145 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 GFERP55789 205 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 MC1RQ01726 317 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 MAMLD1Q13495 774 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 MAP7Q14244 749 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 ERV3-1Q14264 604 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 PPP6R3Q5H9R7 873 aaPredicted RBP13.11□□□□□ -0.31
USF1-206ENST00000491629 CDKAL1Q5VV42 579 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 LRRC66Q68CR7 880 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 DCUN1D2Q6PH85 259 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 AP2M1Q96CW1 435 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 SYT11Q9BT88 431 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 TRIT1Q9H3H1 467 aaKnown RBP13.11□□□□□ -0.31
USF1-206ENST00000491629 CLSTN2Q9H4D0 955 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 DONSONQ9NYP3 566 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 CROTQ9UKG9 612 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 CCDC88CQ9P219 2028 aa13.11□□□□□ -0.31
USF1-206ENST00000491629 MN1Q10571 1320 aaPredicted RBP13.11□□□□□ -0.31
USF1-206ENST00000491629 SEC16AO15027 2179 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 MDC1Q14676 2089 aaKnown RBP13.1□□□□□ -0.31
USF1-206ENST00000491629 INPP4BO15327 924 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 DAPK3O43293 454 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 DNAJB5O75953 348 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 TCF4P15884 667 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 MIPP30301 263 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 DLSTP36957 453 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 HCAR3P49019 387 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 UBE2HP62256 183 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 SH3BP2P78314 561 aa13.1□□□□□ -0.31
USF1-206ENST00000491629 PEX6Q13608 980 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms