RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 CFAP97Q9P2B7 532 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 THEGQ9P2T0 379 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 DNMT3BQ9UBC3 853 aaKnown RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 BCAP29Q9UHQ4 241 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 LNPEPQ9UIQ6 1025 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 HAO1Q9UJM8 370 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 RUVBL2Q9Y230 463 aaKnown RBP6.36□□□□□ -1.39
SF3A3-208ENST00000489537 HS3ST2Q9Y278 367 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 RAI2Q9Y5P3 530 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 PSAT1Q9Y617 370 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 VWA8A3KMH1 1905 aa6.36□□□□□ -1.39
SF3A3-208ENST00000489537 A0A0G2JND7 137 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 WDR91A4D1P6 747 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 GIPC1O14908 333 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 KPNA5O15131 536 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 HDAC3O15379 428 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 HTRA2O43464 458 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 ZMPSTE24O75844 475 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 PGLSO95336 258 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 NFATC1O95644 943 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 LMNAP02545 664 aaKnown RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 SRPRAP08240 638 aaKnown RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 DLDP09622 509 aaKnown RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 BMP4P12644 408 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 ALOX15P16050 662 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 ZNF7P17097 686 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 ITGALP20701 1170 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 RPS3P23396 243 aaKnown RBP eCLIP6.35□□□□□ -1.397e-6■□□□□ 8.7
SF3A3-208ENST00000489537 MSX1P28360 303 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 PTPN4P29074 926 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 PRDX6P30041 224 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 SLC8A1P32418 973 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 RGS4P49798 205 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 CCR3P51677 355 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 ERVK-21P61565 698 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 NFKB2Q00653 900 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 SATB1Q01826 763 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 RIPK1Q13546 671 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 RCN2Q14257 317 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 PCLAFQ15004 111 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 CYTH1Q15438 398 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 KCTD19Q17RG1 926 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 TTLL9Q3SXZ7 439 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 BRAT1Q6PJG6 821 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 CES3Q6UWW8 571 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 ARID3BQ8IVW6 561 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 PHTF2Q8N3S3 785 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 PGBD5Q8N414 524 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 OR7D4Q8NG98 312 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 OR2AP1Q8NGE2 309 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 OR13J1Q8NGT2 312 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 C1orf216Q8TAB5 229 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 STAG3L4Q8TBR4 150 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 SH3RF2Q8TEC5 729 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 KCNJ9Q92806 393 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 ERP27Q96DN0 273 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 MYO19Q96H55 970 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 CDKN2AIPNLQ96HQ2 116 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 NSL1Q96IY1 281 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 AGAP2Q99490 1192 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 GPR63Q9BZJ6 419 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 DRC3Q9H069 523 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 LRMDAQ9H2I8 198 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 TFB2MQ9H5Q4 396 aaKnown RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 EPHX3Q9H6B9 360 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 PIDD1Q9HB75 910 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 MRPL40Q9NQ50 206 aaKnown RBP6.35□□□□□ -1.39
SF3A3-208ENST00000489537 SMPD4Q9NXE4 827 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 GDE1Q9NZC3 331 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 VPS51Q9UID3 782 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 RAP2CQ9Y3L5 183 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 HRH3Q9Y5N1 445 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 OR51B4Q9Y5P0 310 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 CAPN7Q9Y6W3 813 aa6.35□□□□□ -1.39
SF3A3-208ENST00000489537 PABPN1LA6NDY0 278 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 E5RI56 91 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 NPC1O15118 1278 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 FZD6O60353 706 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 GREM1O60565 184 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 TSPAN3O60637 253 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 UGT1A9O60656 530 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 MAGEC1O60732 1142 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 VPS4BO75351 444 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 SRP72O76094 671 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 IPO13O94829 963 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 UBOX5O94941 541 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 GOT2P00505 430 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 RHOP08100 348 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 SLC35E2BP0CK96 405 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ESRRAP11474 423 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 FGF3P11487 239 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PABPC1P11940 636 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 POLR2EP19388 210 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 FDXRP22570 491 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CSKP41240 450 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 RPL14P50914 215 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ZNF140P52738 457 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 IL2P60568 153 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ST8SIA6P61647 398 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms