RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RUBCNLQ9H714 662 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 AKIRIN1Q9H9L7 192 aaPredicted RBP9.13□□□□□ -0.95
SSBP1-212ENST00000489378 PPP4R2Q9NY27 417 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 PPARGC1AQ9UBK2 798 aaKnown RBP9.13□□□□□ -0.95
SSBP1-212ENST00000489378 LHX3Q9UBR4 397 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 LNPEPQ9UIQ6 1025 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 PADI1Q9ULC6 663 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 HPCAL4Q9UM19 191 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 PCDHGB7Q9Y5F8 929 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 HEATR9A2RTY3 570 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 CFAP69A5D8W1 941 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 A8MX80 341 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 MYL1P05976 194 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 ELFN1P0C7U0 828 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 GNA15P30679 374 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 NDST2P52849 883 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 GFERP55789 205 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 LAMB3Q13751 1172 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
SSBP1-212ENST00000489378 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
SSBP1-212ENST00000489378 NLRP14Q86W24 1093 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 CAMK1DQ8IU85 385 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 RASGRP3Q8IV61 690 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 SFRP1Q8N474 314 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 ZNF397Q8NF99 534 aaPredicted RBP9.12□□□□□ -0.95
SSBP1-212ENST00000489378 HCAR2Q8TDS4 363 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 PGAP3Q96FM1 320 aaPredicted RBP9.12□□□□□ -0.95
SSBP1-212ENST00000489378 OR6C1Q96RD1 312 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 TEX101Q9BY14 249 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 MAGEH1Q9H213 219 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 UPF2Q9HAU5 1272 aaKnown RBP9.12□□□□□ -0.95
SSBP1-212ENST00000489378 LHX9Q9NQ69 397 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.12□□□□□ -0.95
SSBP1-212ENST00000489378 ARMCX3Q9UH62 379 aaPredicted RBP9.12□□□□□ -0.95
SSBP1-212ENST00000489378 NTNG1Q9Y2I2 539 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 MYO7BQ6PIF6 2116 aa9.12□□□□□ -0.95
SSBP1-212ENST00000489378 A0A1B0GVL5 298 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 GOLGA6L3A6NEY3 463 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 A6NL46 340 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 C21orf140B9A014 251 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 RAMP2O60895 175 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 SPAG6O75602 509 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 F9P00740 461 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 SNRPB2P08579 225 aaKnown RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 ANKRD34CP0C6C1 535 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 PFKFB1P16118 471 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 ITGA3P26006 1051 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 MAPKAPK2P49137 400 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 PMS1P54277 932 aaKnown RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 PER3P56645 1201 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 ACOX1Q15067 660 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 CYTH1Q15438 398 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 PTPN20Q4JDL3 420 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 ACBD5Q5T8D3 534 aaPredicted RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 MANEALQ5VSG8 457 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 AFMIDQ63HM1 303 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 RWDD4Q6NW29 188 aaKnown RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 FAM199XQ6PEV8 388 aaPredicted RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 BRAT1Q6PJG6 821 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 DOK6Q6PKX4 331 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 ZNF517Q6ZMY9 492 aaPredicted RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 PHLDB2Q86SQ0 1253 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 FAM131BQ86XD5 332 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 C1orf131Q8NDD1 294 aaKnown RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 CCDC47Q96A33 483 aaKnown RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 MAGEB5Q9BZ81 275 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 BRD8Q9H0E9 1235 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 NOL6Q9H6R4 1146 aaKnown RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 PHPT1Q9NRX4 125 aaPredicted RBP9.11□□□□□ -0.95
SSBP1-212ENST00000489378 STAP1Q9ULZ2 295 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 NEU3Q9UQ49 428 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 SLC17A4Q9Y2C5 497 aa9.11□□□□□ -0.95
SSBP1-212ENST00000489378 MN1Q10571 1320 aaPredicted RBP9.1□□□□□ -0.95
SSBP1-212ENST00000489378 FAM72CH0Y354 149 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 ZNF185O15231 689 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 PMM2O15305 246 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 TIAF1O95411 115 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 IVLP07476 585 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 RHOQP17081 205 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 ERCC5P28715 1186 aaPredicted RBP9.1□□□□□ -0.95
SSBP1-212ENST00000489378 PTPN4P29074 926 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 SEPHS1P49903 392 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 CDK3Q00526 305 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 HHEXQ03014 270 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 PEX6Q13608 980 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 RAPSNQ13702 412 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 IL11RAQ14626 422 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 SLC25A52Q3SY17 297 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 C8orf34Q49A92 452 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 RAB6CQ53S08 254 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 INO80DQ53TQ3 878 aaPredicted RBP9.1□□□□□ -0.95
SSBP1-212ENST00000489378 CRB2Q5IJ48 1285 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 CFAP58Q5T655 872 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 FAM72AQ5TYM5 149 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 FAM72DQ6L9T8 149 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 TRNP1Q6NT89 227 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 DPPA4Q7L190 304 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 SYVN1Q86TM6 617 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 FAM72BQ86X60 149 aa9.1□□□□□ -0.95
SSBP1-212ENST00000489378 ZNF354CQ86Y25 554 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms