RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 EFSO43281 561 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 AKR1B10O60218 316 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 MMP2P08253 660 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 MAN1A1P33908 653 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 CD86P42081 329 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 MAPK10P53779 464 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 C16orf72Q14CZ0 275 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 PYCR3Q53H96 274 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 NKAIN2Q5VXU1 208 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 INO80CQ6PI98 192 aaPredicted RBP24.41■■□□□ 1.5
LIME1-206ENST00000487026 ZNF574Q6ZN55 896 aaPredicted RBP24.41■■□□□ 1.5
LIME1-206ENST00000487026 ZNF765Q7L2R6 523 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 ZNF438Q7Z4V0 828 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 NLRP8Q86W28 1048 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 SNRNP27Q8WVK2 155 aaKnown RBP24.41■■□□□ 1.5
LIME1-206ENST00000487026 HDAC11Q96DB2 347 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 NUDT22Q9BRQ3 303 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 CDH19Q9H159 772 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 PRKAB1Q9Y478 270 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 HEY1Q9Y5J3 304 aa24.41■■□□□ 1.5
LIME1-206ENST00000487026 PRAMEF33A0A0G2JMD5 474 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 LRRD1A4D1F6 860 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 PRAMEF10O60809 474 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 ASMTLO95671 621 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 CPNE6O95741 557 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 CA4P22748 312 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 CD1CP29017 333 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 CFHR1Q03591 330 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 ZBTB17Q13105 803 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 SRSF6Q13247 344 aaKnown RBP24.4■■□□□ 1.5
LIME1-206ENST00000487026 QPCTQ16769 361 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 NRSN1Q8IZ57 195 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 PLD5Q8N7P1 536 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 CNTD1Q8N815 330 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 RCBTB1Q8NDN9 531 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 EXD1Q8NHP7 514 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 USP7Q93009 1102 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 COX14Q96I36 57 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 WDR24Q96S15 920 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 CCNL2Q96S94 520 aaPredicted RBP24.4■■□□□ 1.5
LIME1-206ENST00000487026 CMKLR1Q99788 373 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 CEP41Q9BYV8 373 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 SPTLC3Q9NUV7 552 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 HAUS2Q9NVX0 235 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 ZNHIT6Q9NWK9 470 aaKnown RBP24.4■■□□□ 1.5
LIME1-206ENST00000487026 LCMT1Q9UIC8 334 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 PCYT1BQ9Y5K3 369 aaPredicted RBP24.4■■□□□ 1.5
LIME1-206ENST00000487026 SCN8AQ9UQD0 1980 aa24.4■■□□□ 1.5
LIME1-206ENST00000487026 C1orf232A0A0U1RR37 186 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 SSU72P8A0A1W2PR75 194 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 NVLO15381 856 aaKnown RBP24.39■■□□□ 1.49
LIME1-206ENST00000487026 CBFA2T2O43439 604 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 ATP1A1P05023 1023 aaKnown RBP24.39■■□□□ 1.49
LIME1-206ENST00000487026 LY6DQ14210 128 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 NR1D2Q14995 579 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 ZFAND4Q86XD8 727 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 GALNT13Q8IUC8 556 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 TTC9Q92623 222 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 ZNF830Q96NB3 372 aaPredicted RBP24.39■■□□□ 1.49
LIME1-206ENST00000487026 FOXJ2Q9P0K8 574 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 ZNHIT2Q9UHR6 403 aa24.39■■□□□ 1.49
LIME1-206ENST00000487026 CNOT6Q9ULM6 557 aaKnown RBP24.39■■□□□ 1.49
LIME1-206ENST00000487026 OAS3Q9Y6K5 1087 aaKnown RBP24.39■■□□□ 1.49
LIME1-206ENST00000487026 AHCTF1Q8WYP5 2266 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 C3orf70A6NLC5 250 aaPredicted RBP24.38■■□□□ 1.49
LIME1-206ENST00000487026 CCL4P13236 92 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 RPL26P61254 145 aaKnown RBP24.38■■□□□ 1.49
LIME1-206ENST00000487026 PPIDQ08752 370 aaKnown RBP24.38■■□□□ 1.49
LIME1-206ENST00000487026 AP1B1Q10567 949 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 TRIM14Q14142 442 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 NPNTQ6UXI9 565 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 B4GALNT4Q76KP1 1039 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 KDELC2Q7Z4H8 507 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 TMEM159Q96B96 161 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 MLPHQ9BV36 600 aaPredicted RBP24.38■■□□□ 1.49
LIME1-206ENST00000487026 SEMA4CQ9C0C4 833 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 ABHD10Q9NUJ1 306 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 DNPEPQ9ULA0 475 aa24.38■■□□□ 1.49
LIME1-206ENST00000487026 RPL26L1Q9UNX3 145 aaKnown RBP24.38■■□□□ 1.49
LIME1-206ENST00000487026 HELZ2Q9BYK8 2649 aaKnown RBP24.37■■□□□ 1.49
LIME1-206ENST00000487026 IGHV5-10-1A0A0J9YXX1 117 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 ANKRD66B4E2M5 251 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 EML2O95834 649 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 PYGLP06737 847 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 TNNT1P13805 278 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 MPSTP25325 297 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 SPINT3P49223 89 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 PEX6Q13608 980 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 GALNT3Q14435 633 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 ZNF761Q86XN6 746 aaPredicted RBP24.37■■□□□ 1.49
LIME1-206ENST00000487026 VSTM4Q8IW00 320 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.37■■□□□ 1.49
LIME1-206ENST00000487026 CCDC42Q96M95 316 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 LYSMD1Q96S90 227 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 MAK16Q9BXY0 300 aaKnown RBP24.37■■□□□ 1.49
LIME1-206ENST00000487026 FAM83DQ9H4H8 585 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 NHEJ1Q9H9Q4 299 aaPredicted RBP24.37■■□□□ 1.49
LIME1-206ENST00000487026 SEPT10Q9P0V9 454 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 ACSL6Q9UKU0 697 aa24.37■■□□□ 1.49
LIME1-206ENST00000487026 FADS2P1A8MWK0 482 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms