RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 AGO1Q9UL18 857 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-207ENST00000486828 LCHNA4D1U4 455 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 PPP6CO00743 305 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 NDUFS3O75489 264 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 STC2O76061 302 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 CAPNS1P04632 268 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 GPX3P22352 226 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 CORO1AP31146 461 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 SGSHP51688 502 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 ATP6V0D1P61421 351 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 RAD51Q06609 339 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 GRM2Q14416 872 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 FOXB2Q5VYV0 432 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 C8orf82Q6P1X6 216 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 FBXL19Q6PCT2 694 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 FAM126BQ8IXS8 530 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 SNX31Q8N9S9 440 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 TWIST2Q8WVJ9 160 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 ARMC5Q96C12 935 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 DEFB118Q96PH6 123 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 GCNAQ96QF7 691 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 PKP2Q99959 881 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 CWH43Q9H720 699 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 FAM50BQ9Y247 325 aa17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 KIAA0100Q14667 2235 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-207ENST00000486828 A0A1B0GVM2 712 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 SUPT3HB4E1H0 165 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 CLASP2O75122 1294 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 SUPT3HO75486 399 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 F11P03951 625 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 C8BP07358 591 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 RPL17P18621 184 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 OR1D2P34982 312 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 TRAP1Q12931 704 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 PDK3Q15120 406 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 FAM43BQ6ZT52 329 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 ST13P4Q8IZP2 240 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 LRRC43Q8N309 656 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 FBXO39Q8N4B4 442 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 LPCAT1Q8NF37 534 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 OR9I1Q8NGQ6 314 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 PIP4K2CQ8TBX8 421 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 NSUN5Q96P11 429 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 GBP5Q96PP8 586 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 CD300AQ9UGN4 299 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 CROTQ9UKG9 612 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 RNF112Q9ULX5 631 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 TBC1D30Q9Y2I9 924 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 BACE2Q9Y5Z0 518 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 BBIP1A8MTZ0 92 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 CBX4O00257 560 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 TXNDC9O14530 226 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 PIP5K1BO14986 540 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 DENRO43583 198 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 EFEMP2O95967 443 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 HMGA1P17096 107 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 LPOP22079 712 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 FOXA1P55317 472 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 GEN1Q17RS7 908 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 FUNDC1Q8IVP5 155 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 TRPC4APQ8TEL6 797 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 TMEM181Q9P2C4 612 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 IKZF3Q9UKT9 509 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 VPS9D1Q9Y2B5 631 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 RAI2Q9Y5P3 530 aa17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 OAS3Q9Y6K5 1087 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-207ENST00000486828 PRORSD1PA6NEY8 169 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 EEF1DP29692 281 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 CLCQ05315 142 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 LCP2Q13094 533 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 KIF19Q2TAC6 998 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 USP41Q3LFD5 358 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 ADGRF1Q5T601 910 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 PHYKPLQ8IUZ5 450 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 MARVELD2Q8N4S9 558 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 NKAPQ8N5F7 415 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 ROPN1LQ96C74 230 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 BIRC8Q96P09 236 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 TSC22D3Q99576 134 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 GPR21Q99679 349 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 ZBED2Q9BTP6 218 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 PCDHAC1Q9H158 963 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 Q9H521 79 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 GKN1Q9NS71 199 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 TRPM5Q9NZQ8 1165 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 RAB26Q9ULW5 256 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 PCDHGC4Q9Y5F7 938 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 PTGDR2Q9Y5Y4 395 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 GBF1Q92538 1859 aa17.89■□□□□ 0.45
PDLIM7-207ENST00000486828 SYCE1LA8MT33 242 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 PITPNM1O00562 1244 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 ECI2O75521 394 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 PYGLP06737 847 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 CCNHP51946 323 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 CHN2P52757 468 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 RALGDSQ12967 914 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 TSNQ15631 228 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 PTPRNQ16849 979 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 SAMD4BQ5PRF9 694 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms