RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 VPS26AO75436 327 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 FGF19O95750 216 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 IGSF6O95976 241 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 PKMP14618 531 aaKnown RBP20.27■□□□□ 0.84
HPS3-206ENST00000486530 DDX6P26196 483 aaKnown RBP eCLIP20.27■□□□□ 0.84
HPS3-206ENST00000486530 CDKN1CP49918 316 aaPredicted RBP20.27■□□□□ 0.84
HPS3-206ENST00000486530 ADARP55265 1226 aaKnown RBP20.27■□□□□ 0.84
HPS3-206ENST00000486530 PLPP4Q5VZY2 271 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 SPRED2Q7Z698 418 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 STK40Q8N2I9 435 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 NKAPQ8N5F7 415 aaKnown RBP20.27■□□□□ 0.84
HPS3-206ENST00000486530 KIAA1191Q96A73 305 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 ASB2Q96Q27 587 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 ATOH8Q96SQ7 321 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 C19orf43Q9BQ61 176 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 C17orf80Q9BSJ5 609 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 RTKNQ9BST9 563 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 EVLQ9UI08 416 aaPredicted RBP20.27■□□□□ 0.84
HPS3-206ENST00000486530 CLEC4EQ9ULY5 219 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 FAM50BQ9Y247 325 aa20.27■□□□□ 0.84
HPS3-206ENST00000486530 H3BMM5 538 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 SDHDO14521 159 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 KERAO60938 352 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 ARHGEF15O94989 841 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 ANP32DO95626 131 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 PIK3R1P27986 724 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 CD70P32970 193 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 SLC25A3Q00325 362 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 CACNG1Q06432 222 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 OR4D1Q15615 310 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 TRMT5Q32P41 509 aaKnown RBP20.26■□□□□ 0.83
HPS3-206ENST00000486530 KHDC1Q4VXA5 237 aaKnown RBP20.26■□□□□ 0.83
HPS3-206ENST00000486530 SETMARQ53H47 684 aaPredicted RBP20.26■□□□□ 0.83
HPS3-206ENST00000486530 ACSBG2Q5FVE4 666 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 NXNQ6DKJ4 435 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 PAQR3Q6TCH7 311 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 LYSMD3Q7Z3D4 306 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 CAMK1DQ8IU85 385 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 STAG3L4Q8TBR4 150 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 WDR60Q8WVS4 1066 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.26■□□□□ 0.83
HPS3-206ENST00000486530 FAM136AQ96C01 138 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 MRGBPQ9NV56 204 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 SUPT7LO94864 414 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 CSPG5O95196 566 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 THRAP10827 490 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 CTPS1P17812 591 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 PTGER3P43115 390 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 EPHA5P54756 1037 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 XIAPP98170 497 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 PTPRRQ15256 657 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 RTL10Q7L3V2 364 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 PTGR2Q8N8N7 351 aaPredicted RBP20.26■□□□□ 0.83
HPS3-206ENST00000486530 OR6K2Q8NGY2 324 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 CEP70Q8NHQ1 597 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 EXT2Q93063 718 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 GPR21Q99679 349 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 ATP13A3Q9H7F0 1226 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 MEAF6Q9HAF1 191 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 SLC30A1Q9Y6M5 507 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 DOCK6Q96HP0 2047 aa20.26■□□□□ 0.83
HPS3-206ENST00000486530 MYOGP15173 224 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 CCR2P41597 374 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 BTKQ06187 659 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 CUL3Q13618 768 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 ZRSR2Q15696 482 aaKnown RBP20.25■□□□□ 0.83
HPS3-206ENST00000486530 UNC50Q53HI1 259 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 SHKBP1Q8TBC3 707 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 KCNJ9Q92806 393 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 STMN2Q93045 179 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 LENG8Q96PV6 779 aaPredicted RBP20.25■□□□□ 0.83
HPS3-206ENST00000486530 SMG9Q9H0W8 520 aaKnown RBP20.25■□□□□ 0.83
HPS3-206ENST00000486530 TLR9Q9NR96 1032 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 HCFC1R1Q9NWW0 138 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 SLC7A8Q9UHI5 535 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 TRMT6Q9UJA5 497 aaKnown RBP20.25■□□□□ 0.83
HPS3-206ENST00000486530 INTS6Q9UL03 887 aaKnown RBP20.25■□□□□ 0.83
HPS3-206ENST00000486530 FNDC3AQ9Y2H6 1198 aaKnown RBP20.25■□□□□ 0.83
HPS3-206ENST00000486530 RWDD3Q9Y3V2 267 aa20.25■□□□□ 0.83
HPS3-206ENST00000486530 A0A0J9YYE9 177 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 LOC100653049A0A140TA62 436 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 CCDC189A1A4V9 331 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 RGSL1A5PLK6 1076 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 C5orf67F2Z3F1 127 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 UBXN8O00124 270 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 KRT34O76011 436 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 TRBC1P01850 177 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 ESR1P03372 595 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 ALPIP09923 528 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 MTHFD2P13995 350 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 INHBCP55103 352 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 CAMK1Q14012 370 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 HERC3Q15034 1050 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 PITRM1Q5JRX3 1037 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 CTSL3PQ5NE16 218 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 RPS27LQ71UM5 84 aaKnown RBP20.24■□□□□ 0.83
HPS3-206ENST00000486530 CMTM8Q8IZV2 173 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 RP9Q8TA86 221 aaKnown RBP20.24■□□□□ 0.83
HPS3-206ENST00000486530 ACTRT2Q8TDY3 377 aa20.24■□□□□ 0.83
HPS3-206ENST00000486530 CLPTM1LQ96KA5 538 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms