RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 LRRC61Q9BV99 259 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 SPATA16Q9BXB7 569 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 FRMD8Q9BZ67 464 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-214ENST00000482733 ETNK1Q9HBU6 452 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 FGF22Q9HCT0 170 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 IL17CQ9P0M4 197 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 PNMA8BQ9ULN7 279 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-214ENST00000482733 SLC17A4Q9Y2C5 497 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 PKP3Q9Y446 797 aa16.5■□□□□ 0.23
HMGN1-214ENST00000482733 GOLGA6L10A0A0M3HER8 536 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 SPAARA0A1B0GVQ0 90 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 PRSS38A1L453 326 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 LMO7DNF2Z398 122 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 USP12O75317 370 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 CRTAMO95727 393 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 CEACAM5P06731 702 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 BPIP17213 487 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 LMAN1P49257 510 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 FOXK2Q01167 660 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 SEMA5AQ13591 1074 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 SPARCL1Q14515 664 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 TAF1AQ15573 450 aaPredicted RBP16.49■□□□□ 0.23
HMGN1-214ENST00000482733 PAPD7Q5XG87 772 aaKnown RBP16.49■□□□□ 0.23
HMGN1-214ENST00000482733 ALS2CLQ60I27 953 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 DENND5AQ6IQ26 1287 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 LVRNQ6Q4G3 990 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 RD3Q7Z3Z2 195 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 SCG3Q8WXD2 468 aaKnown RBP16.49■□□□□ 0.23
HMGN1-214ENST00000482733 MAGOHBQ96A72 148 aaKnown RBP16.49■□□□□ 0.23
HMGN1-214ENST00000482733 PDXPQ96GD0 296 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 C19orf43Q9BQ61 176 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 TCEAL2Q9H3H9 227 aaPredicted RBP16.49■□□□□ 0.23
HMGN1-214ENST00000482733 RAB6BQ9NRW1 208 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 EVA1BQ9NVM1 165 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 NCKIPSDQ9NZQ3 722 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 MOSPD1Q9UJG1 213 aa16.49■□□□□ 0.23
HMGN1-214ENST00000482733 APOBEC2Q9Y235 224 aaKnown RBP16.49■□□□□ 0.23
HMGN1-214ENST00000482733 LRRK1Q38SD2 2015 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 CTAGE9A4FU28 777 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 STX7O15400 261 aaKnown RBP16.48■□□□□ 0.23
HMGN1-214ENST00000482733 FFAR2O15552 330 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 SIGLEC6O43699 453 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 SUN1O94901 812 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 TRIM16O95361 564 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 GAS8O95995 478 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 IVLP07476 585 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 ANXA6P08133 673 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 ETS1P14921 441 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 LPOP22079 712 aaPredicted RBP16.48■□□□□ 0.23
HMGN1-214ENST00000482733 RPL22P35268 128 aaKnown RBP16.48■□□□□ 0.23
HMGN1-214ENST00000482733 SPAM1P38567 509 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 KCNJ1P48048 391 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 OLIG2Q13516 323 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 CYP1B1Q16678 543 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 N4BP2L1Q5TBK1 243 aaPredicted RBP16.48■□□□□ 0.23
HMGN1-214ENST00000482733 GKN2Q86XP6 184 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 FAM181AQ8N9Y4 354 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 AP1M1Q9BXS5 423 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 CARS2Q9HA77 564 aaKnown RBP16.48■□□□□ 0.23
HMGN1-214ENST00000482733 CYP4F12Q9HCS2 524 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 BPIFA1Q9NP55 256 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 VPS18Q9P253 973 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 CNOT6Q9ULM6 557 aaKnown RBP16.48■□□□□ 0.23
HMGN1-214ENST00000482733 DOLKQ9UPQ8 538 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 TMEM131Q92545 1883 aa16.48■□□□□ 0.23
HMGN1-214ENST00000482733 CABIN1Q9Y6J0 2220 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 FADS2P1A8MWK0 482 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 TRIM38O00635 465 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 INPP4BO15327 924 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 GIMD1P0DJR0 217 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 CDK4P11802 303 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 CKMT2P17540 419 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 CDH17Q12864 832 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 MSLNQ13421 630 aaPredicted RBP16.47■□□□□ 0.23
HMGN1-214ENST00000482733 C1orf61Q13536 156 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 PROX2Q3B8N5 592 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 ZCCHC8Q6NZY4 707 aaKnown RBP16.47■□□□□ 0.23
HMGN1-214ENST00000482733 TAB3Q8N5C8 712 aaPredicted RBP16.47■□□□□ 0.23
HMGN1-214ENST00000482733 GLIS1Q8NBF1 620 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 GLMNQ92990 594 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 SCARF2Q96GP6 870 aaPredicted RBP16.47■□□□□ 0.23
HMGN1-214ENST00000482733 VPS35Q96QK1 796 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 CLPBQ9H078 707 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 RMI1Q9H9A7 625 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 MRPL40Q9NQ50 206 aaKnown RBP16.47■□□□□ 0.23
HMGN1-214ENST00000482733 EIF2B3Q9NR50 452 aaKnown RBP16.47■□□□□ 0.23
HMGN1-214ENST00000482733 TRNAU1APQ9NX07 287 aaKnown RBP16.47■□□□□ 0.23
HMGN1-214ENST00000482733 SUFUQ9UMX1 484 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 PCDHGA1Q9Y5H4 931 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 ARL5AQ9Y689 179 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 SAR1BQ9Y6B6 198 aa16.47■□□□□ 0.23
HMGN1-214ENST00000482733 GLYATL1P3A0A0U1RQE8 302 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 GPR89AB7ZAQ6 455 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 ZNF185O15231 689 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 YY2O15391 372 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 PHF2O75151 1096 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 ASMTLO95671 621 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 ADRB1P08588 477 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 FTH1P19P0C7X4 201 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 ZSCAN5DPP0CG00 497 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms