RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 TEX45Q8NA69 505 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 POMGNT1Q8WZA1 660 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 TXNDC15Q96J42 360 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 NR1H4Q96RI1 486 aaPredicted RBP3.83□□□□□ -1.8
GTF3A-207ENST00000482655 FIZ1Q96SL8 496 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 SLC32A1Q9H598 525 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 PRKRIP1Q9H875 184 aaPredicted RBP3.83□□□□□ -1.8
GTF3A-207ENST00000482655 BABAM1Q9NWV8 329 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 EHD2Q9NZN4 543 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 LIMA1Q9UHB6 759 aaKnown RBP3.83□□□□□ -1.8
GTF3A-207ENST00000482655 LYVE1Q9Y5Y7 322 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 PSAT1Q9Y617 370 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 KDM3AQ9Y4C1 1321 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 ARHGEF10O15013 1369 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 ATP10DQ9P241 1426 aa3.83□□□□□ -1.8
GTF3A-207ENST00000482655 ADGRB1O14514 1584 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 COL5A2P05997 1499 aaPredicted RBP3.82□□□□□ -1.8
GTF3A-207ENST00000482655 LRRC53A6NM62 1247 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 SMTNL1A8MU46 457 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 C17orf100A8MU93 164 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 EIF3CLB5ME19 914 aaKnown RBP3.82□□□□□ -1.8
GTF3A-207ENST00000482655 DOK2O60496 412 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 HNRNPCL1O60812 293 aaKnown RBP3.82□□□□□ -1.8
GTF3A-207ENST00000482655 LDB3O75112 727 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 SERPINC1P01008 464 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 GALTP07902 379 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 ITGB8P26012 769 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 CPOXP36551 454 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 PPARGP37231 505 aaPredicted RBP3.82□□□□□ -1.8
GTF3A-207ENST00000482655 PDLIM4P50479 330 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 BLKP51451 505 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 COASYQ13057 564 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 CUL4AQ13619 759 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 VEPH1Q14D04 833 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 SLC15A2Q16348 729 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 MEA1Q16626 185 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 GSTA3Q16772 222 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 FBXO43Q4G163 708 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 SLC9B1Q4ZJI4 515 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 CFAP58Q5T655 872 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 SNX30Q5VWJ9 437 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 TYW3Q6IPR3 259 aaKnown RBP3.82□□□□□ -1.8
GTF3A-207ENST00000482655 NAPEPLDQ6IQ20 393 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 PRSS45Q7RTY3 260 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 RBFAQ8N0V3 343 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 SETD9Q8NE22 299 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 KLHL15Q96M94 604 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 DUX5Q96PT3 197 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 CLSTN3Q9BQT9 956 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 USP44Q9H0E7 712 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 MUC13Q9H3R2 512 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 PCDHB16Q9NRJ7 776 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 OCIAD1Q9NX40 245 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 POLG2Q9UHN1 485 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 PIAS3Q9Y6X2 628 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 KAT6BQ8WYB5 2073 aa3.82□□□□□ -1.8
GTF3A-207ENST00000482655 QRICH2Q9H0J4 1663 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 BCL9O00512 1426 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 NPIPB15A6NHN6 443 aaPredicted RBP3.81□□□□□ -1.8
GTF3A-207ENST00000482655 B4DLN1 442 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 SLC16A5O15375 505 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 PTP4A3O75365 173 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 CAMTA2O94983 1202 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 SLC2A4P14672 509 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 ZNF8P17098 575 aaPredicted RBP3.81□□□□□ -1.8
GTF3A-207ENST00000482655 MYBPC2Q14324 1141 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 WTAPQ15007 396 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 TAF11Q15544 211 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 ZNF628Q5EBL2 1059 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 ZNF667Q5HYK9 610 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 MFSD4BQ5TF39 518 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 CDC73Q6P1J9 531 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 TMEM154Q6P9G4 183 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.81□□□□□ -1.81e-6■■■■□ 21.8
GTF3A-207ENST00000482655 IKBIPQ70UQ0 350 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 ARMC9Q7Z3E5 817 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 SLC46A3Q7Z3Q1 461 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 CUZD1Q86UP6 607 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 FAM160B2Q86V87 743 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 FRMD1Q8N878 549 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 RASSF8Q8NHQ8 419 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 SCFD2Q8WU76 684 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 DNASE2BQ8WZ79 361 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 USP6NLQ92738 828 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 FAM149B1Q96BN6 582 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 IGSF21Q96ID5 467 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 RSRC1Q96IZ7 334 aaKnown RBP3.81□□□□□ -1.8
GTF3A-207ENST00000482655 PIP5K1AQ99755 562 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 SLC25A33Q9BSK2 321 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 C1QTNF4Q9BXJ3 329 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 NPFFR1Q9GZQ6 430 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 GHITMQ9H3K2 345 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 CXorf56Q9H5V9 222 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 RETREG1Q9H6L5 497 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 BRF2Q9HAW0 419 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 SEPT11Q9NVA2 429 aaKnown RBP3.81□□□□□ -1.8
GTF3A-207ENST00000482655 HCFC1R1Q9NWW0 138 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 KIAA1456Q9P272 454 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 NLKQ9UBE8 527 aa3.81□□□□□ -1.8
GTF3A-207ENST00000482655 HDAC6Q9UBN7 1215 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms