RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PMPCBO75439 489 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 POLD2P49005 469 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 RWDD2BP57060 319 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 NOMO1Q15155 1222 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 ISXQ2M1V0 245 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 CERCAMQ5T4B2 595 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 CCDC70Q6NSX1 233 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 DOK6Q6PKX4 331 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 KDELC2Q7Z4H8 507 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 PTCD2Q8WV60 388 aaKnown RBP16.91■□□□□ 0.3
HSPG2-209ENST00000480900 WDR24Q96S15 920 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 SRPK1Q96SB4 655 aaKnown RBP16.91■□□□□ 0.3
HSPG2-209ENST00000480900 OSBPL8Q9BZF1 889 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 CDH19Q9H159 772 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 FAM83DQ9H4H8 585 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 SUDS3Q9H7L9 328 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-209ENST00000480900 ZFYVE1Q9HBF4 777 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 RAD18Q9NS91 495 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 KLHL8Q9P2G9 620 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-209ENST00000480900 NFKBIL1Q9UBC1 381 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-209ENST00000480900 TRHDEQ9UKU6 1024 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 ZNF711Q9Y462 761 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 ITPR1Q14643 2758 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 B4DGG1 531 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 NTN3O00634 580 aaPredicted RBP16.9■□□□□ 0.3
HSPG2-209ENST00000480900 GLB1P16278 677 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 NFKB1P19838 968 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 ADCY8P40145 1251 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 CETN2P41208 172 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 DCDC1P59894 354 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 KIF5AQ12840 1032 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 PEX6Q13608 980 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 SPIDRQ14159 915 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 C14orf28Q4W4Y0 310 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 CCDC181Q5TID7 509 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 KDELC1Q6UW63 502 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 TRIM74Q86UV6 250 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 NRROSQ86YC3 692 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 SYCE1Q8N0S2 351 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 ZNF567Q8N184 647 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 ALG3Q92685 438 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 EID2BQ96D98 161 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 OR2M4Q96R27 311 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 FCRL5Q96RD9 977 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 DPEP2Q9H4A9 486 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 UBP1Q9NZI7 540 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 TAAR2Q9P1P5 351 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 VPS18Q9P253 973 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 RABGEF1Q9UJ41 708 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 SHOC2Q9UQ13 582 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 TMEM98Q9Y2Y6 226 aa16.9■□□□□ 0.3
HSPG2-209ENST00000480900 ZNF106Q9H2Y7 1883 aaKnown RBP16.89■□□□□ 0.29
HSPG2-209ENST00000480900 MACROD2A1Z1Q3 448 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 H7C0C1 242 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 INPP4BO15327 924 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 BRINP1O60477 761 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 USP12O75317 370 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 EPOP01588 193 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 PIRTP0C851 137 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 PNLIPP16233 465 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 ATP5OP48047 213 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 WNT3AP56704 352 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 CTBSQ01459 385 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 HLTFQ14527 1009 aaKnown RBP eCLIP16.89■□□□□ 0.29
HSPG2-209ENST00000480900 PYCR3Q53H96 274 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 PID1Q7Z2X4 250 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 PEX26Q7Z412 305 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 TMC3Q7Z5M5 1100 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 C17orf82Q86X59 251 aaPredicted RBP16.89■□□□□ 0.29
HSPG2-209ENST00000480900 ACTL9Q8TC94 416 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 FERMT1Q9BQL6 677 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 HERPUD2Q9BSE4 406 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 DESI2Q9BSY9 194 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 GPR63Q9BZJ6 419 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 SPATS2LQ9NUQ6 558 aaKnown RBP16.89■□□□□ 0.29
HSPG2-209ENST00000480900 APPL1Q9UKG1 709 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 AMFRQ9UKV5 643 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 CNOT6Q9ULM6 557 aaKnown RBP16.89■□□□□ 0.29
HSPG2-209ENST00000480900 GPSM3Q9Y4H4 160 aa16.89■□□□□ 0.29
HSPG2-209ENST00000480900 LOC285095A0A1B0GVY8 99 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 FADS2P1A8MWK0 482 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 MIF4GDA9UHW6 222 aaKnown RBP16.88■□□□□ 0.29
HSPG2-209ENST00000480900 NUDT21O43809 227 aaKnown RBP16.88■□□□□ 0.29
HSPG2-209ENST00000480900 TJP3O95049 919 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 AK4P27144 223 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-209ENST00000480900 TNNT3P45378 269 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-209ENST00000480900 LSSP48449 732 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 OTUD4Q01804 1114 aaKnown RBP16.88■□□□□ 0.29
HSPG2-209ENST00000480900 MPP3Q13368 585 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 LRP8Q14114 963 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 SLC30A9Q6PML9 568 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 GALNT13Q8IUC8 556 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 SFTPA2Q8IWL1 248 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 SNIP1Q8TAD8 396 aaKnown RBP16.88■□□□□ 0.29
HSPG2-209ENST00000480900 ZDHHC1Q8WTX9 485 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 OXNAD1Q96HP4 312 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-209ENST00000480900 ZSCAN5AQ9BUG6 496 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 SYNDIG1Q9H7V2 258 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 POLR1BQ9H9Y6 1135 aa16.88■□□□□ 0.29
HSPG2-209ENST00000480900 TRIM10Q9UDY6 481 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms