RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CCDC28BQ9BUN5 200 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 GATA5Q9BWX5 397 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 LRRC3Q9BY71 257 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ACE2Q9BYF1 805 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 DRC3Q9H069 523 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ILKAPQ9H0C8 392 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 UPF3AQ9H1J1 476 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SMOC2Q9H3U7 446 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TASP1Q9H6P5 420 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SPC25Q9HBM1 224 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 GLOD4Q9HC38 313 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 S100A14Q9HCY8 104 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TCF7L2Q9NQB0 619 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ENTPD7Q9NQZ7 604 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SEMA3GQ9NS98 782 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ABCC13Q9NSE7 274 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 MRGBPQ9NV56 204 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TMEM30AQ9NV96 361 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TBC1D13Q9NVG8 400 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 OXSMQ9NWU1 459 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 MIOSQ9NXC5 875 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 IL1RAPL1Q9NZN1 696 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SLAMF8Q9P0V8 285 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 BCAP29Q9UHQ4 241 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SLC39A10Q9ULF5 831 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 PRPF19Q9UMS4 504 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SUFUQ9UMX1 484 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ARHGAP26Q9UNA1 814 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TCAF1Q9Y4C2 921 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TIMM13Q9Y5L4 95 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SNX10Q9Y5X0 201 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TTC3P53804 2025 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 VWA8A3KMH1 1905 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TANC1Q9C0D5 1861 aa4.96□□□□□ -1.61
SF3B6-202ENST00000478050 FAM221AA4D161 298 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 MAGEA13PA6NCF6 341 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 MEIS3P2A8K0S8 358 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 WASH4PA8MWX3 477 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 H3BS24 57 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 DFFAO00273 331 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 MATN2O00339 956 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 HDAC3O15379 428 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 NPHS1O60500 1241 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 MAFKO60675 156 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 NEBLO76041 1014 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 PIGNO95427 931 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 EOMESO95936 686 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CHRNA1P02708 482 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 AMHP03971 560 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 PDHA1P08559 390 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 THRAP10827 490 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 STMN1P16949 149 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 TPH1P17752 444 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ITGAXP20702 1163 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 BDNFP23560 247 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 IGFBP6P24592 240 aaPredicted RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ARRB2P32121 409 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CCR1P32246 355 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ADRA1AP35348 466 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CD151P48509 253 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 GIPRP48546 466 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 RPL14P50914 215 aaKnown RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 RABGGTBP53611 331 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SLC12A2P55011 1212 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 DNAJB13P59910 316 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 RAB10P61026 200 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 NKX3-2P78367 333 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SLC25A3Q00325 362 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 DSG1Q02413 1049 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CLCQ05315 142 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 TUSC3Q13454 348 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CUL3Q13618 768 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SMAD1Q15797 465 aaKnown RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 DDR2Q16832 855 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ST3GAL2Q16842 350 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SH2D4BQ5SQS7 431 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 AFMIDQ63HM1 303 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SEL1L3Q68CR1 1132 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 OVOS1Q6IE37 1185 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 LRRC8EQ6NSJ5 796 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 RWDD4Q6NW29 188 aaKnown RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 MSANTD2Q6P1R3 559 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 TMEM154Q6P9G4 183 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 C17orf99Q6UX52 265 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 NAPRTQ6XQN6 538 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 KIAA0408Q6ZU52 694 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 OTOP3Q7RTS5 596 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 PDZD3Q86UT5 571 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SERINC5Q86VE9 423 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SPATA2LQ8IUW3 424 aaPredicted RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 SLC41A1Q8IVJ1 513 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 KIRREL3Q8IZU9 778 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 AFAP1L2Q8N4X5 818 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CPSF7Q8N684 471 aaKnown RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 CNTD1Q8N815 330 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 ZNF781Q8N8C0 355 aa4.96□□□□□ -1.62
SF3B6-202ENST00000478050 RTL3Q8N8U3 475 aaKnown RBP4.96□□□□□ -1.62
SF3B6-202ENST00000478050 IPMKQ8NFU5 416 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms